LoGo

De novo motifs for CGI CAGE TSS -robust 180k set

Total target sequences = 19322
Total background sequences = 29239


Rank
Motif
P-value
Enrichment
Best Match and Details
1
1e-400
7749.0 (40.10%) targets
7590.3 (25.95%) backgr.
POL003.1_GC-box (0.95)
More Info/Top 5 Known Motifs
2
1e-215
3422.0 (17.71%) targets
2997.0 (10.25%) backgr.
POL004.1_CCAAT-box (0.95)
More Info/Top 5 Known Motifs
3
1e-212
7404.0 (38.32%) targets
8176.4 (27.95%) backgr.
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq/Homer (0.96)
More Info/Top 5 Known Motifs
4
1e-155
4511.0 (23.35%) targets
4665.3 (15.95%) backgr.
TYY1_f2_HM09 (0.74)
More Info/Top 5 Known Motifs
5
1e-153
2686.0 (13.90%) targets
2401.5 (8.21%) backgr.
NRF1(NRF)/MCF7-NRF1-ChIP-Seq/Homer (0.97)
More Info/Top 5 Known Motifs
6
1e-149
5639.0 (29.18%) targets
6201.2 (21.20%) backgr.
POU5F1.p2.SwissRegulon.nucfreq (0.79)
More Info/Top 5 Known Motifs
7
1e-132
3393.0 (17.56%) targets
3375.1 (11.54%) backgr.
ATF1_si_HM09 (0.92)
More Info/Top 5 Known Motifs
8
1e-129
7313.0 (37.85%) targets
8688.5 (29.70%) backgr.
MA0405.1_TEA1 (0.66)
More Info/Top 5 Known Motifs
9
1e-128
5520.0 (28.57%) targets
6199.5 (21.19%) backgr.
NRF1.p2.SwissRegulon.nucfreq (0.73)
More Info/Top 5 Known Motifs
10
1e-118
5132.0 (26.56%) targets
5749.6 (19.66%) backgr.
MA0121.1_ARR10 (0.81)
More Info/Top 5 Known Motifs
11
1e-107
740.0 (3.83%) targets
443.3 (1.52%) backgr.
IKZF1_f1_HM09 (0.67)
More Info/Top 5 Known Motifs
12
1e-101
5278.0 (27.31%) targets
6099.4 (20.85%) backgr.
PH0077.1_Hoxd12 (0.67)
More Info/Top 5 Known Motifs
13
1e-95
1231.0 (6.37%) targets
982.3 (3.36%) backgr.
TYY1_f2_HM09 (0.98)
More Info/Top 5 Known Motifs
14
1e-94
5039.0 (26.08%) targets
5831.0 (19.93%) backgr.
PB0055.1_Rfx4_1 (0.78)
More Info/Top 5 Known Motifs
15
1e-92
3013.0 (15.59%) targets
3152.9 (10.78%) backgr.
MA0443.1_btd (0.64)
More Info/Top 5 Known Motifs
16
1e-89
4502.0 (23.30%) targets
5141.5 (17.58%) backgr.
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer (0.81)
More Info/Top 5 Known Motifs
17
1e-85
3960.0 (20.49%) targets
4445.8 (15.20%) backgr.
MA0325.1_LYS14 (0.81)
More Info/Top 5 Known Motifs
18
1e-81
2294.0 (11.87%) targets
2309.3 (7.89%) backgr.
MA0289.1_DAL80 (0.84)
More Info/Top 5 Known Motifs
19
1e-80
759.0 (3.93%) targets
530.2 (1.81%) backgr.
MA0032.1_FOXC1 (0.79)
More Info/Top 5 Known Motifs
20
1e-78
6999.0 (36.22%) targets
8747.7 (29.90%) backgr.
PH0107.1_Msx2 (0.71)
More Info/Top 5 Known Motifs
21
1e-78
3505.0 (18.14%) targets
3897.3 (13.32%) backgr.
MA0280.1_CAT8 (0.69)
More Info/Top 5 Known Motifs
22
1e-75
3153.0 (16.32%) targets
3459.1 (11.83%) backgr.
MA0416.1_YAP3 (0.69)
More Info/Top 5 Known Motifs
23
1e-74
3430.0 (17.75%) targets
3833.5 (13.10%) backgr.
MA0060.1_NFYA (0.73)
More Info/Top 5 Known Motifs
24
1e-65
6190.0 (32.03%) targets
7742.2 (26.47%) backgr.
MA0394.1_STP1 (0.63)
More Info/Top 5 Known Motifs
25
1e-63
4735.0 (24.50%) targets
5715.3 (19.54%) backgr.
PH0148.1_Pou3f3 (0.67)
More Info/Top 5 Known Motifs
26
1e-62
968.0 (5.01%) targets
820.4 (2.80%) backgr.
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer (0.71)
More Info/Top 5 Known Motifs
27
1e-62
6355.0 (32.89%) targets
8023.5 (27.43%) backgr.
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer (0.86)
More Info/Top 5 Known Motifs
28
1e-58
5235.0 (27.09%) targets
6471.2 (22.12%) backgr.
MA0295.1_FHL1 (0.64)
More Info/Top 5 Known Motifs
29
1e-57
4000.0 (20.70%) targets
4765.3 (16.29%) backgr.
PB0192.1_Tcfap2e_2 (0.88)
More Info/Top 5 Known Motifs
30
1e-57
2210.0 (11.44%) targets
2372.8 (8.11%) backgr.
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer (0.72)
More Info/Top 5 Known Motifs
31
1e-55
5998.0 (31.04%) targets
7593.5 (25.96%) backgr.
ZBTB33/GM12878-ZBTB33-ChIP-Seq/Homer (0.85)
More Info/Top 5 Known Motifs
32
1e-53
1767.0 (9.14%) targets
1837.3 (6.28%) backgr.
MA0100.1_Myb (0.71)
More Info/Top 5 Known Motifs
33
1e-49
3873.0 (20.04%) targets
4676.1 (15.99%) backgr.
MA0414.1_XBP1 (0.77)
More Info/Top 5 Known Motifs
34
1e-47
2913.0 (15.08%) targets
3395.3 (11.61%) backgr.
MA0414.1_XBP1 (0.78)
More Info/Top 5 Known Motifs
35
1e-46
1124.0 (5.82%) targets
1082.4 (3.70%) backgr.
PAX6_f1_HM09 (0.65)
More Info/Top 5 Known Motifs
36
1e-46
1352.0 (7.00%) targets
1362.7 (4.66%) backgr.
PB0139.1_Irf5_2 (0.66)
More Info/Top 5 Known Motifs
37
1e-45
2155.0 (11.15%) targets
2404.0 (8.22%) backgr.
PB0039.1_Klf7_1 (0.76)
More Info/Top 5 Known Motifs
38
1e-44
1259.0 (6.52%) targets
1262.9 (4.32%) backgr.
MA0231.1_lbe (0.76)
More Info/Top 5 Known Motifs
39
1e-41
1745.0 (9.03%) targets
1900.6 (6.50%) backgr.
PH0048.1_Hoxa13 (0.64)
More Info/Top 5 Known Motifs
40
1e-37
1901.0 (9.84%) targets
2137.2 (7.31%) backgr.
MA0401.1_SWI4 (0.62)
More Info/Top 5 Known Motifs
41
1e-37
862.0 (4.46%) targets
822.3 (2.81%) backgr.
MA0126.1_ovo (0.83)
More Info/Top 5 Known Motifs
42
1e-34
1548.0 (8.01%) targets
1700.8 (5.81%) backgr.
MA0185.1_Deaf1 (0.73)
More Info/Top 5 Known Motifs
43
1e-34
4512.0 (23.35%) targets
5773.6 (19.74%) backgr.
MF0001.1_ETS_class (0.72)
More Info/Top 5 Known Motifs
44
1e-33
1271.0 (6.58%) targets
1351.6 (4.62%) backgr.
PB0108.1_Atf1_2 (0.71)
More Info/Top 5 Known Motifs
45
1e-33
1107.0 (5.73%) targets
1146.5 (3.92%) backgr.
MA0394.1_STP1 (0.65)
More Info/Top 5 Known Motifs
46
1e-32
1869.0 (9.67%) targets
2146.1 (7.34%) backgr.
PB0179.1_Sp100_2 (0.65)
More Info/Top 5 Known Motifs
47
1e-31
1445.0 (7.48%) targets
1594.7 (5.45%) backgr.
MA0205.1_Trl (0.65)
More Info/Top 5 Known Motifs
48
1e-29
2259.0 (11.69%) targets
2702.4 (9.24%) backgr.
MF0001.1_ETS_class (0.78)
More Info/Top 5 Known Motifs
49
1e-29
985.0 (5.10%) targets
1024.3 (3.50%) backgr.
MA0260.1_che-1 (0.70)
More Info/Top 5 Known Motifs
50
1e-28
1729.0 (8.95%) targets
2000.6 (6.84%) backgr.
PB0180.1_Sp4_2 (0.88)
More Info/Top 5 Known Motifs
51
1e-27
808.0 (4.18%) targets
819.1 (2.80%) backgr.
PB0056.1_Rfxdc2_1 (0.69)
More Info/Top 5 Known Motifs
52
1e-26
3397.0 (17.58%) targets
4316.8 (14.76%) backgr.
MA0129.1_TGA1A (0.58)
More Info/Top 5 Known Motifs
53
1e-26
1135.0 (5.87%) targets
1235.4 (4.22%) backgr.
MA0305.1_GCR2 (0.77)
More Info/Top 5 Known Motifs
54
1e-26
1472.0 (7.62%) targets
1676.0 (5.73%) backgr.
PB0097.1_Zfp281_1 (0.90)
More Info/Top 5 Known Motifs
55
1e-26
847.0 (4.38%) targets
872.2 (2.98%) backgr.
Rfx1(HTH)/NPC-Rfx1-ChIP-Seq/Homer (0.97)
More Info/Top 5 Known Motifs
56
1e-26
4055.0 (20.99%) targets
5259.8 (17.98%) backgr.
PAX8_f1_HM09 (0.56)
More Info/Top 5 Known Motifs
57
1e-24
1985.0 (10.27%) targets
2389.4 (8.17%) backgr.
MA0411.1_UPC2 (0.77)
More Info/Top 5 Known Motifs
58
1e-22
2367.0 (12.25%) targets
2942.9 (10.06%) backgr.
PB0123.1_Foxl1_2 (0.77)
More Info/Top 5 Known Motifs
59
1e-21
602.0 (3.12%) targets
600.2 (2.05%) backgr.
MA0354.1_PDR8 (0.81)
More Info/Top 5 Known Motifs
60
1e-18
2992.0 (15.48%) targets
3888.7 (13.29%) backgr.
ZN219_f1_HM09 (0.69)
More Info/Top 5 Known Motifs

 
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