Detailed information for motif36

P-value:1e-46
ln P-value:-1.074e+02
Information content per bp:1.593
Number of target sequences with motif:1352.0
Percentage of target sequences with motif:7.00%
Number of background sequences with motif:1362.7
Percentage of background sequences with motif:  4.66%
Average position of motif in targets:324.9 +/- 243.1bp
Average position of motif in background:275.6 +/- 206.6bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.04
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PB0139.1_Irf5_2

Match rank:  1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAGCGACWA----
TTGACCGAGAATTCC
  

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq/Homer

Match rank:  2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGCGACWA-
NTGATTGACAGN
  

PB0138.1_Irf4_2

Match rank:  3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGCGACWA----
GNNACCGAGAATNNN
  

PB0179.1_Sp100_2

Match rank:  4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCGACWA-
NNTTTANNCGACGNA
  

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match rank:  5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGCGACWA--
TGAGTGACAGSC