Detailed information for motif50

P-value:1e-28
ln P-value:-6.521e+01
Information content per bp:1.887
Number of target sequences with motif:1729.0
Percentage of target sequences with motif:8.95%
Number of background sequences with motif:2000.6
Percentage of background sequences with motif:  6.84%
Average position of motif in targets:310.6 +/- 224.4bp
Average position of motif in background:260.3 +/- 194.9bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.06
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PB0180.1_Sp4_2

Match rank:  1
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---GACACGCCT---
NNGGCCACGCCTTTN
  

MA0450.1_hkb

Match rank:  2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GACACGCCT-
-TCACGCCCC
  

TFDP1.p2.SwissRegulon.nucfreq

Match rank:  3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GACACGCCT
--CGCGCC-
  

PL0018.1_hlh-25

Match rank:  4
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GACACGCCT---
NNGGGACACGCGCCNN
  

PL0004.1_hlh-27

Match rank:  5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GACACGCCT--
NNGGGACACGCGCNT