Detailed information for motif12

P-value:1e-101
ln P-value:-2.326e+02
Information content per bp:1.722
Number of target sequences with motif:5278.0
Percentage of target sequences with motif:27.31%
Number of background sequences with motif:6099.4
Percentage of background sequences with motif:  20.85%
Average position of motif in targets:323.2 +/- 238.3bp
Average position of motif in background:275.7 +/- 205.1bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.13
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PH0077.1_Hoxd12

Match rank:  1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----WHTKGCGAB----
NNNATTTTACGACNNTN
  

PH0048.1_Hoxa13

Match rank:  2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---WHTKGCGAB----
ANATTTTACGAGNNNN
  

MA0411.1_UPC2

Match rank:  3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:WHTKGCGAB
-TATACGA-
  

PH0067.1_Hoxc12

Match rank:  4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----WHTKGCGAB----
GNNNTTTTACGACCTNA
  

PH0076.1_Hoxd11

Match rank:  5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----WHTKGCGAB----
ANNATTTTACGACNTNA