Detailed information for motif13

P-value:1e-95
ln P-value:-2.192e+02
Information content per bp:1.676
Number of target sequences with motif:1231.0
Percentage of target sequences with motif:6.37%
Number of background sequences with motif:982.3
Percentage of background sequences with motif:  3.36%
Average position of motif in targets:303.9 +/- 222.9bp
Average position of motif in background:284.9 +/- 178.7bp
Strand bias (log2 ratio + to - strand density):-0.2
Multiplicity (# of sites on avg that occur together):  1.06
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

TYY1_f2_HM09

Match rank:  1
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:GCCGCCATCTTGVN
GCCGCCATCTTG--
  

YY1.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.80
Offset:3
Orientation:forward strand
Alignment:GCCGCCATCTTGVN
---GCCATC-----
  

MA0095.1_YY1

Match rank:  3
Score:0.76
Offset:3
Orientation:forward strand
Alignment:GCCGCCATCTTGVN
---GCCATC-----
  

GATA1..3.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GCCGCCATCTTGVN
----CCATCT----
  

PB0164.1_Smad3_2

Match rank:  5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCATCTTGVN
TACGCCCCGCCACTCTG--