Detailed information for motif30

P-value:1e-57
ln P-value:-1.323e+02
Information content per bp:1.881
Number of target sequences with motif:2210.0
Percentage of target sequences with motif:11.44%
Number of background sequences with motif:2372.8
Percentage of background sequences with motif:  8.11%
Average position of motif in targets:305.7 +/- 237.1bp
Average position of motif in background:269.7 +/- 200.8bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.11
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match rank:  1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTGTAGT---
NNHTGTGGTTWN
  

RUNX1..3.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTGTAGT-
TTTGTGGTT
  

RUNX1_f1_HM09

Match rank:  3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTGTAGT--
TTTGTGGTTA
  

RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer

Match rank:  4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTGTAGT---
CTGTGGTTTN
  

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq/Homer

Match rank:  5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTGTAGT--
GCTGTGGTTT