Detailed information for motif2

P-value:1e-215
ln P-value:-4.963e+02
Information content per bp:1.731
Number of target sequences with motif:3422.0
Percentage of target sequences with motif:17.71%
Number of background sequences with motif:2997.0
Percentage of background sequences with motif:  10.25%
Average position of motif in targets:289.4 +/- 186.4bp
Average position of motif in background:226.9 +/- 163.0bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.37
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

POL004.1_CCAAT-box

Match rank:  1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TGATTGGYYR--
TGATTGGCTANN
  

MA0060.1_NFYA

Match rank:  2
Score:0.94
Offset:-4
Orientation:reverse strand
Alignment:----TGATTGGYYR--
NCNCTGATTGGCTGNN
  

NFYA_f1_HM09

Match rank:  3
Score:0.94
Offset:-3
Orientation:forward strand
Alignment:---TGATTGGYYR
CTCTGATTGGCTG
  

NFYB_f1_HM09

Match rank:  4
Score:0.93
Offset:-3
Orientation:forward strand
Alignment:---TGATTGGYYR
CTCTGATTGGCTG
  

MA0315.1_HAP4

Match rank:  5
Score:0.92
Offset:-7
Orientation:reverse strand
Alignment:-------TGATTGGYYR
NNGNNNCTGATTGGN--