Detailed information for motif56

P-value:1e-26
ln P-value:-6.009e+01
Information content per bp:1.530
Number of target sequences with motif:4055.0
Percentage of target sequences with motif:20.99%
Number of background sequences with motif:5259.8
Percentage of background sequences with motif:  17.98%
Average position of motif in targets:321.9 +/- 245.7bp
Average position of motif in background:272.3 +/- 195.8bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.08
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PAX8_f1_HM09

Match rank:  1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TACCGCTCGACTCA-
-CCCGCTTCAGTNAN
  

POL001.1_MTE

Match rank:  2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TACCGCTCGACTCA---
NCGACCGCTCCGCTCGAAA
  

MA0099.2_AP1

Match rank:  3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TACCGCTCGACTCA
-------TGACTCA
  

FOSL2.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TACCGCTCGACTCA-----
-------TGACTCANNGTN
  

BACH2.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TACCGCTCGACTCA----
---NNNATGACTCACNNN