De novo motifs for non-CGI CAGE clusters overlapping annotated promoters

Rank	Motif	P-value	Enrichment	Best Match and Details
1		1e-205	5079.0 (30.42%) targets 6765.9 (20.37%) backgr.	POL003.1_GC-box (0.95) More Info/Top 5 Known Motifs
2		1e-168	928.0 (5.56%) targets 644.4 (1.94%) backgr.	JunD(bZIP)/K562-JunD-ChIP-Seq/Homer (0.95) More Info/Top 5 Known Motifs
3		1e-162	5219.0 (31.26%) targets 7354.7 (22.14%) backgr.	ERG(ETS)/VCaP-ERG-ChIP-Seq/Homer (0.96) More Info/Top 5 Known Motifs
4		1e-141	5244.0 (31.40%) targets 7587.0 (22.84%) backgr.	ATF3_f1_HM09 (0.86) More Info/Top 5 Known Motifs
5		1e-138	3984.0 (23.86%) targets 5412.9 (16.29%) backgr.	PB0097.1_Zfp281_1 (0.91) More Info/Top 5 Known Motifs
6		1e-122	3483.0 (20.86%) targets 4694.4 (14.13%) backgr.	Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer (0.88) More Info/Top 5 Known Motifs
7		1e-121	2622.0 (15.70%) targets 3280.7 (9.88%) backgr.	ENCODE UW.Motif.0001 (0.96) More Info/Top 5 Known Motifs
8		1e-109	6026.0 (36.09%) targets 9348.9 (28.14%) backgr.	MA0108.1_TBP (0.85) More Info/Top 5 Known Motifs
9		1e-108	5460.0 (32.70%) targets 8322.6 (25.05%) backgr.	MF0001.1_ETS_class (0.90) More Info/Top 5 Known Motifs
10		1e-101	3226.0 (19.32%) targets 4439.5 (13.36%) backgr.	CEBPZ_si_HM09 (0.90) More Info/Top 5 Known Motifs
11		1e-91	2251.0 (13.48%) targets 2896.7 (8.72%) backgr.	MA0327.1_MATA1 (0.76) More Info/Top 5 Known Motifs
12		1e-82	4731.0 (28.33%) targets 7290.8 (21.95%) backgr.	MYFfamily.p2.SwissRegulon.nucfreq (0.84) More Info/Top 5 Known Motifs
13		1e-81	1803.0 (10.80%) targets 2249.4 (6.77%) backgr.	ENCODE UW.Motif.0038 (0.90) More Info/Top 5 Known Motifs
14		1e-81	3218.0 (19.27%) targets 4619.0 (13.90%) backgr.	MEF2D_f1_HM09 (0.84) More Info/Top 5 Known Motifs
15		1e-78	5382.0 (32.23%) targets 8546.7 (25.73%) backgr.	SCL/HPC7-Scl-ChIP-Seq/Homer (0.74) More Info/Top 5 Known Motifs
16		1e-68	5693.0 (34.09%) targets 9260.5 (27.88%) backgr.	Znf263(Zf)/K562-Znf263-ChIP-Seq/Homer (0.79) More Info/Top 5 Known Motifs
17		1e-64	1544.0 (9.25%) targets 1963.3 (5.91%) backgr.	DBP_si_HM09 (0.91) More Info/Top 5 Known Motifs
18		1e-61	1697.0 (10.16%) targets 2229.5 (6.71%) backgr.	POU2F1..3.p2.SwissRegulon.nucfreq (0.90) More Info/Top 5 Known Motifs
19		1e-60	574.0 (3.44%) targets 530.3 (1.60%) backgr.	RFX3_f1_HM09 (0.92) More Info/Top 5 Known Motifs
20		1e-58	5348.0 (32.03%) targets 8768.6 (26.40%) backgr.	TLX2.p2.SwissRegulon.nucfreq (0.90) More Info/Top 5 Known Motifs
21		1e-53	3131.0 (18.75%) targets 4776.0 (14.38%) backgr.	MA0365.1_RFX1 (0.94) More Info/Top 5 Known Motifs
22		1e-53	2669.0 (15.98%) targets 3967.8 (11.94%) backgr.	MA0295.1_FHL1 (0.86) More Info/Top 5 Known Motifs
23		1e-50	3155.0 (18.89%) targets 4868.0 (14.65%) backgr.	ENCODE UW.Motif.0011 (0.88) More Info/Top 5 Known Motifs
24		1e-47	4598.0 (27.54%) targets 7545.5 (22.71%) backgr.	MA0170.1_C15 (0.88) More Info/Top 5 Known Motifs
25		1e-45	1521.0 (9.11%) targets 2087.7 (6.28%) backgr.	TFEB.p2.SwissRegulon.nucfreq (0.94) More Info/Top 5 Known Motifs
26		1e-43	5246.0 (31.42%) targets 8828.0 (26.57%) backgr.	PH0016.1_Cux1_1 (0.66) More Info/Top 5 Known Motifs
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