Detailed information for motif8

P-value:1e-109
ln P-value:-2.521e+02
Information content per bp:1.593
Number of target sequences with motif:6026.0
Percentage of target sequences with motif:36.09%
Number of background sequences with motif:9348.9
Percentage of background sequences with motif:  28.14%
Average position of motif in targets:279.7 +/- 632.6bp
Average position of motif in background:225.9 +/- 131.7bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.39
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0108.1_TBP

Match rank:  1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-TATATADVS-----
GTATAAAAGGCGGGG
  

POL012.1_TATA-Box

Match rank:  2
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-TATATADVS-----
GTATAAAAGGCGGGG
  

MA0108.2_TBP

Match rank:  3
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-TATATADVS-----
GTATAAAAGGCGGGG
  

TBP_f1_HM09

Match rank:  4
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TATATADVS
GGTATAAATTC
  

TBP.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-TATATADVS-----
CTATAAAAGGNNNGG