Known motif enrichment results for skin fibroblasts
Total target sequences = 1202Total background sequences = 48539
Rank | Motif |
Name | P-value | q-value(Benjamini) | Enrichment | Motif File |
PDF |
1
|  | HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer | 1e-148 | 0.0000 | 408.0 (33.94%) targets3761.8 (7.75%) backgr. | motif file (matrix) | |
2
|  | AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer | 1e-139 | 0.0000 | 444.0 (36.94%) targets4747.3 (9.78%) backgr. | motif file (matrix) | |
3
|  | Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer | 1e-97 | 0.0000 | 212.0 (17.64%) targets1395.5 (2.88%) backgr. | motif file (matrix) | |
4
|  | MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-29 | 0.0000 | 120.0 (9.98%) targets1443.5 (2.97%) backgr. | motif file (matrix) | |
5
|  | NF-E2(bZIP)/K562-NFE2-ChIP-Seq/Homer | 1e-24 | 0.0000 | 54.0 (4.49%) targets352.6 (0.73%) backgr. | motif file (matrix) | |
6
|  | TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-24 | 0.0000 | 295.0 (24.54%) targets6494.3 (13.38%) backgr. | motif file (matrix) | |
7
|  | TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq/Homer | 1e-23 | 0.0000 | 242.0 (20.13%) targets4998.2 (10.30%) backgr. | motif file (matrix) | |
8
|  | Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-22 | 0.0000 | 46.0 (3.83%) targets278.7 (0.57%) backgr. | motif file (matrix) | |
9
|  | ETS1(ETS)/Jurkat-ETS1-ChIP-Seq/Homer | 1e-21 | 0.0000 | 353.0 (29.37%) targets8690.1 (17.91%) backgr. | motif file (matrix) | |
10
|  | Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-20 | 0.0000 | 369.0 (30.70%) targets9342.4 (19.25%) backgr. | motif file (matrix) | |
11
|  | ETV1(ETS)/GIST48-ETV1-ChIP-Seq/Homer | 1e-20 | 0.0000 | 427.0 (35.52%) targets11371.3 (23.44%) backgr. | motif file (matrix) | |
12
|  | EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq/Homer | 1e-19 | 0.0000 | 251.0 (20.88%) targets5621.3 (11.59%) backgr. | motif file (matrix) | |
13
|  | ERG(ETS)/VCaP-ERG-ChIP-Seq/Homer | 1e-18 | 0.0000 | 481.0 (40.02%) targets13584.9 (28.00%) backgr. | motif file (matrix) | |
14
|  | Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-18 | 0.0000 | 44.0 (3.66%) targets317.3 (0.65%) backgr. | motif file (matrix) | |
15
|  | GABPA(ETS)/Jurkat-GABPa-ChIP-Seq/Homer | 1e-17 | 0.0000 | 300.0 (24.96%) targets7400.9 (15.25%) backgr. | motif file (matrix) | |
16
|  | Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq/Homer | 1e-15 | 0.0000 | 125.0 (10.40%) targets2269.5 (4.68%) backgr. | motif file (matrix) | |
17
|  | AARE(HLH)/mES-cMyc-ChIP-Seq/Homer | 1e-15 | 0.0000 | 49.0 (4.08%) targets482.3 (0.99%) backgr. | motif file (matrix) | |
18
|  | PU.1(ETS)/ThioMac-PU.1-ChIP-Seq/Homer | 1e-13 | 0.0000 | 177.0 (14.73%) targets3912.1 (8.06%) backgr. | motif file (matrix) | |
19
|  | Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-13 | 0.0000 | 196.0 (16.31%) targets4606.7 (9.49%) backgr. | motif file (matrix) | |
20
|  | CEBP:AP1/ThioMac-CEBPb-ChIP-Seq/Homer | 1e-12 | 0.0000 | 200.0 (16.64%) targets4747.8 (9.78%) backgr. | motif file (matrix) | |
21
|  | RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer | 1e-11 | 0.0000 | 266.0 (22.13%) targets7143.0 (14.72%) backgr. | motif file (matrix) | |
22
|  | MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-11 | 0.0000 | 232.0 (19.30%) targets6035.6 (12.44%) backgr. | motif file (matrix) | |
23
|  | EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq/Homer | 1e-10 | 0.0000 | 189.0 (15.72%) targets4677.7 (9.64%) backgr. | motif file (matrix) | |
24
|  | CEBP(bZIP)/CEBPb-ChIP-Seq/Homer | 1e-9 | 0.0000 | 162.0 (13.48%) targets3894.2 (8.03%) backgr. | motif file (matrix) | |
25
|  | SCL/HPC7-Scl-ChIP-Seq/Homer | 1e-9 | 0.0000 | 895.0 (74.46%) targets32172.3 (66.30%) backgr. | motif file (matrix) | |
26
|  | Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-9 | 0.0000 | 180.0 (14.98%) targets4575.2 (9.43%) backgr. | motif file (matrix) | |
27
|  | Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer | 1e-9 | 0.0000 | 611.0 (50.83%) targets20421.8 (42.09%) backgr. | motif file (matrix) | |
28
|  | SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq/Homer | 1e-9 | 0.0000 | 279.0 (23.21%) targets7968.1 (16.42%) backgr. | motif file (matrix) | |
29
|  | EGR(Zf)/K562-EGR1-ChIP-Seq/Homer | 1e-9 | 0.0000 | 82.0 (6.82%) targets1588.2 (3.27%) backgr. | motif file (matrix) | |
30
|  | RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-8 | 0.0000 | 205.0 (17.05%) targets5453.5 (11.24%) backgr. | motif file (matrix) | |
31
|  | PU.1-IRF/Bcell-PU.1-ChIP-Seq/Homer | 1e-8 | 0.0000 | 352.0 (29.28%) targets10712.7 (22.08%) backgr. | motif file (matrix) | |
32
|  | c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq/Homer | 1e-8 | 0.0000 | 88.0 (7.32%) targets1819.2 (3.75%) backgr. | motif file (matrix) | |
33
|  | Klf4(Zf)/mES-Klf4-ChIP-Seq/Homer | 1e-8 | 0.0000 | 127.0 (10.57%) targets3009.4 (6.20%) backgr. | motif file (matrix) | |
34
|  | Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-8 | 0.0000 | 158.0 (13.14%) targets4030.8 (8.31%) backgr. | motif file (matrix) | |
35
|  | RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer | 1e-7 | 0.0000 | 182.0 (15.14%) targets4848.1 (9.99%) backgr. | motif file (matrix) | |
36
|  | NFAT:AP1/Jurkat-NFATC1-ChIP-Seq/Homer | 1e-7 | 0.0000 | 63.0 (5.24%) targets1194.3 (2.46%) backgr. | motif file (matrix) | |
37
|  | Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer | 1e-7 | 0.0000 | 107.0 (8.90%) targets2509.7 (5.17%) backgr. | motif file (matrix) | |
38
|  | Lhx3(Homeobox)/Forebrain-p300-ChIP-Seq/Homer | 1e-7 | 0.0000 | 227.0 (18.89%) targets6510.9 (13.42%) backgr. | motif file (matrix) | |
39
|  | RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq/Homer | 1e-6 | 0.0000 | 179.0 (14.89%) targets4914.9 (10.13%) backgr. | motif file (matrix) | |
40
|  | ELF1(ETS)/Jurkat-ELF1-ChIP-Seq/Homer | 1e-6 | 0.0000 | 156.0 (12.98%) targets4163.1 (8.58%) backgr. | motif file (matrix) | |
41
|  | Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq/Homer/ | 1e-6 | 0.0000 | 103.0 (8.57%) targets2486.2 (5.12%) backgr. | motif file (matrix) | |
42
|  | Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-6 | 0.0000 | 443.0 (36.86%) targets14688.9 (30.27%) backgr. | motif file (matrix) | |
43
|  | Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-6 | 0.0000 | 389.0 (32.36%) targets12661.8 (26.09%) backgr. | motif file (matrix) | |
44
|  | CArG(MADS)/PUER-Srf-ChIP-Seq/Homer | 1e-6 | 0.0000 | 86.0 (7.15%) targets2002.7 (4.13%) backgr. | motif file (matrix) | |
45
|  | Sp1(Zf)/Promoter/Homer | 1e-5 | 0.0000 | 97.0 (8.07%) targets2369.3 (4.88%) backgr. | motif file (matrix) | |
46
|  | TATA-Box(TBP)/Promoter/Homer | 1e-5 | 0.0000 | 274.0 (22.80%) targets8581.3 (17.69%) backgr. | motif file (matrix) | |
47
|  | Tlx?/NPC-H3K4me1-ChIP-Seq/Homer | 1e-5 | 0.0000 | 136.0 (11.31%) targets3750.7 (7.73%) backgr. | motif file (matrix) | |
48
|  | NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq/Homer | 1e-4 | 0.0000 | 226.0 (18.80%) targets6943.4 (14.31%) backgr. | motif file (matrix) | |
49
|  | AR-halfsite(NR)/LNCaP-AR-ChIP-Seq/Homer | 1e-4 | 0.0000 | 737.0 (61.31%) targets26795.3 (55.22%) backgr. | motif file (matrix) | |
50
|  | NFkB-p65-Rel(RHD)/LPS-exp/Homer | 1e-4 | 0.0001 | 28.0 (2.33%) targets457.0 (0.94%) backgr. | motif file (matrix) | |
51
|  | EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer | 1e-4 | 0.0001 | 67.0 (5.57%) targets1570.6 (3.24%) backgr. | motif file (matrix) | |
52
|  | Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer | 1e-4 | 0.0001 | 362.0 (30.12%) targets12084.1 (24.90%) backgr. | motif file (matrix) | |
53
|  | p53(p53)/p53-ChIP-Chip/Homer | 1e-4 | 0.0002 | 7.0 (0.58%) targets38.5 (0.08%) backgr. | motif file (matrix) | |
54
|  | Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq/Homer | 1e-4 | 0.0003 | 391.0 (32.53%) targets13357.4 (27.53%) backgr. | motif file (matrix) | |
55
|  | PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq/Homer | 1e-4 | 0.0003 | 50.0 (4.16%) targets1122.9 (2.31%) backgr. | motif file (matrix) | |
56
|  | STAT4(Stat)/CD4-Stat4-ChIP-Seq/Homer | 1e-4 | 0.0003 | 236.0 (19.63%) targets7536.2 (15.53%) backgr. | motif file (matrix) | |
57
|  | MyoD(HLH)/Myotube-MyoD-ChIP-Seq/Homer | 1e-4 | 0.0003 | 225.0 (18.72%) targets7137.9 (14.71%) backgr. | motif file (matrix) | |
58
|  | PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-4 | 0.0003 | 441.0 (36.69%) targets15322.6 (31.58%) backgr. | motif file (matrix) | |
59
|  | JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-3 | 0.0004 | 27.0 (2.25%) targets483.3 (1.00%) backgr. | motif file (matrix) | |
60
|  | Stat3+il23(Stat)/CD4-Stat3-ChIP-Seq/Homer | 1e-3 | 0.0004 | 186.0 (15.47%) targets5767.7 (11.89%) backgr. | motif file (matrix) | |
61
|  | ETS(ETS)/Promoter/Homer | 1e-3 | 0.0008 | 92.0 (7.65%) targets2540.7 (5.24%) backgr. | motif file (matrix) | |
62
|  | Znf263(Zf)/K562-Znf263-ChIP-Seq/Homer | 1e-3 | 0.0008 | 478.0 (39.77%) targets16928.0 (34.89%) backgr. | motif file (matrix) | |
63
|  | Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer | 1e-3 | 0.0008 | 347.0 (28.87%) targets11853.2 (24.43%) backgr. | motif file (matrix) | |
64
|  | Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-3 | 0.0009 | 131.0 (10.90%) targets3891.8 (8.02%) backgr. | motif file (matrix) | |
65
|  | ETS:RUNX/Jurkat-RUNX1-ChIP-Seq/Homer | 1e-3 | 0.0010 | 35.0 (2.91%) targets740.8 (1.53%) backgr. | motif file (matrix) | |
66
|  | Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer | 1e-3 | 0.0011 | 55.0 (4.58%) targets1355.3 (2.79%) backgr. | motif file (matrix) | |
67
|  | Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq/Homer | 1e-3 | 0.0011 | 284.0 (23.63%) targets9520.5 (19.62%) backgr. | motif file (matrix) | |
68
|  | Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq/Homer | 1e-3 | 0.0014 | 193.0 (16.06%) targets6173.2 (12.72%) backgr. | motif file (matrix) | |
69
|  | Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq/Homer | 1e-3 | 0.0018 | 93.0 (7.74%) targets2646.1 (5.45%) backgr. | motif file (matrix) | |
70
|  | NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq/Homer | 1e-3 | 0.0020 | 421.0 (35.02%) targets14879.5 (30.67%) backgr. | motif file (matrix) | |
71
|  | GRE/RAW264.7-GRE-ChIP-Seq/Homer | 1e-3 | 0.0020 | 59.0 (4.91%) targets1524.7 (3.14%) backgr. | motif file (matrix) | |
72
|  | Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-3 | 0.0021 | 329.0 (27.37%) targets11338.3 (23.37%) backgr. | motif file (matrix) | |
73
|  | HIF2a(HLH)/O785-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-3 | 0.0021 | 84.0 (6.99%) targets2357.5 (4.86%) backgr. | motif file (matrix) | |
74
|  | GRE(NR/IR3)/A549-GR-ChIP-Seq/Homer | 1e-3 | 0.0021 | 38.0 (3.16%) targets868.7 (1.79%) backgr. | motif file (matrix) | |
75
|  | PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer | 1e-3 | 0.0024 | 127.0 (10.57%) targets3868.0 (7.97%) backgr. | motif file (matrix) | |
76
|  | Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq/Homer | 1e-2 | 0.0031 | 155.0 (12.90%) targets4900.0 (10.10%) backgr. | motif file (matrix) | |
77
|  | STAT6/Macrophage-Stat6-ChIP-Seq/Homer | 1e-2 | 0.0034 | 139.0 (11.56%) targets4337.0 (8.94%) backgr. | motif file (matrix) | |
78
|  | Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | 0.0034 | 70.0 (5.82%) targets1930.0 (3.98%) backgr. | motif file (matrix) | |
79
|  | CRX(Homeobox)/Retina-Crx-ChIP-Seq/Homer | 1e-2 | 0.0036 | 411.0 (34.19%) targets14619.1 (30.13%) backgr. | motif file (matrix) | |
80
|  | Max(HLH)/K562-Max-ChIP-Seq/Homer | 1e-2 | 0.0036 | 144.0 (11.98%) targets4528.7 (9.33%) backgr. | motif file (matrix) | |
81
|  | Stat3(Stat)/mES-Stat3-ChIP-Seq/Homer | 1e-2 | 0.0038 | 133.0 (11.06%) targets4142.3 (8.54%) backgr. | motif file (matrix) | |
82
|  | USF1(HLH)/GM12878-Usf1-ChIP-Seq/Homer | 1e-2 | 0.0055 | 104.0 (8.65%) targets3151.5 (6.49%) backgr. | motif file (matrix) | |
83
|  | PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq/Homer | 1e-2 | 0.0057 | 33.0 (2.75%) targets771.4 (1.59%) backgr. | motif file (matrix) | |
84
|  | Rfx1(HTH)/NPC-Rfx1-ChIP-Seq/Homer | 1e-2 | 0.0062 | 55.0 (4.58%) targets1480.0 (3.05%) backgr. | motif file (matrix) | |
85
|  | FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq/Homer | 1e-2 | 0.0069 | 176.0 (14.64%) targets5791.7 (11.94%) backgr. | motif file (matrix) | |
86
|  | Pax8(Paired/Homeobox)/Rat-Pax8-ChIP-Seq/Homer | 1e-2 | 0.0086 | 91.0 (7.57%) targets2744.0 (5.66%) backgr. | motif file (matrix) | |
87
|  | FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq/Homer | 1e-2 | 0.0090 | 212.0 (17.64%) targets7176.1 (14.79%) backgr. | motif file (matrix) | |
88
|  | STAT1(Stat)/HelaS3-STAT1-ChIP-Seq/Homer | 1e-2 | 0.0097 | 78.0 (6.49%) targets2303.8 (4.75%) backgr. | motif file (matrix) | |
89
|  | CRE(bZIP)/Promoter/Homer | 1e-2 | 0.0098 | 53.0 (4.41%) targets1452.5 (2.99%) backgr. | motif file (matrix) | |
90
|  | MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer | 1e-2 | 0.0102 | 339.0 (28.20%) targets12055.6 (24.85%) backgr. | motif file (matrix) | |
91
|  | Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-2 | 0.0110 | 69.0 (5.74%) targets2007.7 (4.14%) backgr. | motif file (matrix) | |
92
|  | Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-2 | 0.0120 | 57.0 (4.74%) targets1605.0 (3.31%) backgr. | motif file (matrix) | |
93
|  | Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-2 | 0.0128 | 180.0 (14.98%) targets6045.4 (12.46%) backgr. | motif file (matrix) | |
94
|  | Unknown/Homeobox/Limb-p300-ChIP-Seq/Homer | 1e-2 | 0.0128 | 125.0 (10.40%) targets4018.6 (8.28%) backgr. | motif file (matrix) | |
95
|  | ISRE(IRF)/ThioMac-LPS-exp/HOMER | 1e-2 | 0.0137 | 19.0 (1.58%) targets398.6 (0.82%) backgr. | motif file (matrix) | |
96
|  | NF1(CTF)/LNCAP-NF1-ChIP-Seq/Homer | 1e-2 | 0.0144 | 112.0 (9.32%) targets3564.8 (7.35%) backgr. | motif file (matrix) | |
97
|  | IRF4(IRF)/GM12878-IRF4-ChIP-Seq/Homer | 1e-2 | 0.0155 | 93.0 (7.74%) targets2891.7 (5.96%) backgr. | motif file (matrix) | |
98
|  | ZFX(Zf)/mES-Zfx-ChIP-Seq/Homer | 1e-2 | 0.0178 | 358.0 (29.78%) targets12930.4 (26.65%) backgr. | motif file (matrix) | |
99
|  | Hoxc9/Ainv15-Hoxc9-ChIP-Seq/Homer | 1e-2 | 0.0183 | 97.0 (8.07%) targets3056.3 (6.30%) backgr. | motif file (matrix) | |
100
|  | NFkB-p65(RHD)/GM12787-p65-ChIP-Seq/Homer | 1e-2 | 0.0192 | 139.0 (11.56%) targets4596.5 (9.47%) backgr. | motif file (matrix) | |
101
|  | NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | 0.0195 | 204.0 (16.97%) targets7032.4 (14.49%) backgr. | motif file (matrix) | |
102
|  | MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer | 1e-2 | 0.0197 | 59.0 (4.91%) targets1725.2 (3.56%) backgr. | motif file (matrix) | |
103
|  | ARE(NR)/LNCAP-AR-ChIP-Seq/Homer | 1e-2 | 0.0207 | 61.0 (5.07%) targets1800.3 (3.71%) backgr. | motif file (matrix) |
