LoGo

Known motif enrichment results for mammary epithelial cells

Total target sequences = 374
Total background sequences = 49368

Rank
Motif
Name
P-value
q-value
(Benjamini)
Enrichment
Motif File
PDF
1
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer1e-660.0000164.0 (43.85%) targets
4729.5 (9.58%) backgr.
motif file (matrix) pdf
2
HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer1e-650.0000148.0 (39.57%) targets
3795.8 (7.69%) backgr.
motif file (matrix) pdf
3
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer1e-470.000085.0 (22.73%) targets
1477.8 (2.99%) backgr.
motif file (matrix) pdf
4
ETV1(ETS)/GIST48-ETV1-ChIP-Seq/Homer1e-120.0000149.0 (39.84%) targets
11441.3 (23.17%) backgr.
motif file (matrix) pdf
5
p53(p53)/Saos-p53-ChIP-Seq/Homer1e-120.000025.0 (6.68%) targets
524.1 (1.06%) backgr.
motif file (matrix) pdf
6
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-120.000042.0 (11.23%) targets
1507.1 (3.05%) backgr.
motif file (matrix) pdf
7
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq/Homer1e-110.000080.0 (21.39%) targets
4749.7 (9.62%) backgr.
motif file (matrix) pdf
8
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-100.000018.0 (4.81%) targets
289.4 (0.59%) backgr.
motif file (matrix) pdf
9
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-100.000097.0 (25.94%) targets
6453.9 (13.07%) backgr.
motif file (matrix) pdf
10
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq/Homer1e-100.0000118.0 (31.55%) targets
8654.6 (17.52%) backgr.
motif file (matrix) pdf
11
p63(p53)/Keratinocyte-p63-ChIP-Seq/Homer1e-100.000051.0 (13.64%) targets
2393.2 (4.85%) backgr.
motif file (matrix) pdf
12
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-90.0000123.0 (32.89%) targets
9393.5 (19.02%) backgr.
motif file (matrix) pdf
13
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-90.000076.0 (20.32%) targets
4661.1 (9.44%) backgr.
motif file (matrix) pdf
14
NF-E2(bZIP)/K562-NFE2-ChIP-Seq/Homer1e-90.000018.0 (4.81%) targets
356.2 (0.72%) backgr.
motif file (matrix) pdf
15
Klf4(Zf)/mES-Klf4-ChIP-Seq/Homer1e-90.000061.0 (16.31%) targets
3432.8 (6.95%) backgr.
motif file (matrix) pdf
16
ERG(ETS)/VCaP-ERG-ChIP-Seq/Homer1e-80.0000154.0 (41.18%) targets
13528.1 (27.39%) backgr.
motif file (matrix) pdf
17
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-70.000015.0 (4.01%) targets
309.0 (0.63%) backgr.
motif file (matrix) pdf
18
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-70.000070.0 (18.72%) targets
4666.1 (9.45%) backgr.
motif file (matrix) pdf
19
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq/Homer1e-70.000097.0 (25.94%) targets
7457.0 (15.10%) backgr.
motif file (matrix) pdf
20
CEBP(bZIP)/CEBPb-ChIP-Seq/Homer1e-70.000060.0 (16.04%) targets
3851.7 (7.80%) backgr.
motif file (matrix) pdf
21
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-60.0000209.0 (55.88%) targets
20943.8 (42.40%) backgr.
motif file (matrix) pdf
22
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-60.000037.0 (9.89%) targets
1878.2 (3.80%) backgr.
motif file (matrix) pdf
23
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq/Homer1e-60.000040.0 (10.70%) targets
2200.9 (4.46%) backgr.
motif file (matrix) pdf
24
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-60.000061.0 (16.31%) targets
4143.5 (8.39%) backgr.
motif file (matrix) pdf
25
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq/Homer1e-50.000097.0 (25.94%) targets
8102.7 (16.41%) backgr.
motif file (matrix) pdf
26
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq/Homer1e-50.000063.0 (16.84%) targets
4520.8 (9.15%) backgr.
motif file (matrix) pdf
27
AARE(HLH)/mES-cMyc-ChIP-Seq/Homer1e-50.000016.0 (4.28%) targets
502.2 (1.02%) backgr.
motif file (matrix) pdf
28
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq/Homer1e-50.000071.0 (18.98%) targets
5438.7 (11.01%) backgr.
motif file (matrix) pdf
29
CEBP:AP1/ThioMac-CEBPb-ChIP-Seq/Homer1e-50.000164.0 (17.11%) targets
4808.8 (9.74%) backgr.
motif file (matrix) pdf
30
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq/Homer1e-40.000155.0 (14.71%) targets
3960.3 (8.02%) backgr.
motif file (matrix) pdf
31
Rfx1(HTH)/NPC-Rfx1-ChIP-Seq/Homer1e-40.000227.0 (7.22%) targets
1458.7 (2.95%) backgr.
motif file (matrix) pdf
32
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-40.0002112.0 (29.95%) targets
10374.3 (21.00%) backgr.
motif file (matrix) pdf
33
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq/Homer1e-40.000356.0 (14.97%) targets
4276.9 (8.66%) backgr.
motif file (matrix) pdf
34
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-40.000374.0 (19.79%) targets
6208.6 (12.57%) backgr.
motif file (matrix) pdf
35
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq/Homer1e-30.000720.0 (5.35%) targets
1010.4 (2.05%) backgr.
motif file (matrix) pdf
36
CRE(bZIP)/Promoter/Homer1e-30.000726.0 (6.95%) targets
1517.2 (3.07%) backgr.
motif file (matrix) pdf
37
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-30.0012116.0 (31.02%) targets
11343.8 (22.97%) backgr.
motif file (matrix) pdf
38
Tlx?/NPC-H3K4me1-ChIP-Seq/Homer1e-30.002050.0 (13.37%) targets
3999.3 (8.10%) backgr.
motif file (matrix) pdf
39
ETS(ETS)/Promoter/Homer1e-30.002035.0 (9.36%) targets
2483.7 (5.03%) backgr.
motif file (matrix) pdf
40
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-30.0020121.0 (32.35%) targets
12108.5 (24.52%) backgr.
motif file (matrix) pdf
41
Sox2(HMG)/mES-Sox2-ChIP-Seq/Homer1e-30.002066.0 (17.65%) targets
5734.8 (11.61%) backgr.
motif file (matrix) pdf
42
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-30.0027111.0 (29.68%) targets
10999.5 (22.27%) backgr.
motif file (matrix) pdf
43
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer1e-30.004578.0 (20.86%) targets
7283.5 (14.75%) backgr.
motif file (matrix) pdf
44
RFX(HTH)/K562-RFX3-ChIP-Seq/Homer1e-20.005112.0 (3.21%) targets
542.6 (1.10%) backgr.
motif file (matrix) pdf
45
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-20.0056121.0 (32.35%) targets
12456.7 (25.22%) backgr.
motif file (matrix) pdf
46
RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer1e-20.005757.0 (15.24%) targets
4995.5 (10.11%) backgr.
motif file (matrix) pdf
47
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer1e-20.005863.0 (16.84%) targets
5667.3 (11.47%) backgr.
motif file (matrix) pdf
48
p53(p53)/mES-cMyc-ChIP-Seq/Homer1e-20.00636.0 (1.60%) targets
157.6 (0.32%) backgr.
motif file (matrix) pdf
49
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq/Homer1e-20.006533.0 (8.82%) targets
2490.5 (5.04%) backgr.
motif file (matrix) pdf
50
X-box(HTH)/NPC-H3K4me1-ChIP-Seq/Homer1e-20.006614.0 (3.74%) targets
726.4 (1.47%) backgr.
motif file (matrix) pdf
51
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer1e-20.006846.0 (12.30%) targets
3859.3 (7.81%) backgr.
motif file (matrix) pdf
52
Stat3(Stat)/mES-Stat3-ChIP-Seq/Homer1e-20.007748.0 (12.83%) targets
4102.0 (8.31%) backgr.
motif file (matrix) pdf
53
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq/Homer1e-20.008157.0 (15.24%) targets
5104.8 (10.34%) backgr.
motif file (matrix) pdf
54
NFY(CCAAT)/Promoter/Homer1e-20.008760.0 (16.04%) targets
5461.8 (11.06%) backgr.
motif file (matrix) pdf
55
GRE/RAW264.7-GRE-ChIP-Seq/Homer1e-20.014123.0 (6.15%) targets
1629.8 (3.30%) backgr.
motif file (matrix) pdf
56
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq/Homer1e-20.015125.0 (6.68%) targets
1838.8 (3.72%) backgr.
motif file (matrix) pdf
57
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq/Homer1e-20.017661.0 (16.31%) targets
5767.9 (11.68%) backgr.
motif file (matrix) pdf
58
Sp1(Zf)/Promoter/Homer1e-20.019332.0 (8.56%) targets
2598.2 (5.26%) backgr.
motif file (matrix) pdf
59
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-20.0247125.0 (33.42%) targets
13579.8 (27.49%) backgr.
motif file (matrix) pdf
60
NF1(CTF)/LNCAP-NF1-ChIP-Seq/Homer1e-20.024742.0 (11.23%) targets
3727.2 (7.55%) backgr.
motif file (matrix) pdf
61
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-20.025010.0 (2.67%) targets
521.5 (1.06%) backgr.
motif file (matrix) pdf
62
HIF2a(HLH)/O785-HIF2a-ChIP-Seq(GSE34871)/Homer1e-20.025032.0 (8.56%) targets
2658.0 (5.38%) backgr.
motif file (matrix) pdf
63
ARE(NR)/LNCAP-AR-ChIP-Seq/Homer1e-20.025625.0 (6.68%) targets
1938.6 (3.93%) backgr.
motif file (matrix) pdf
64
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq/Homer1e-20.026416.0 (4.28%) targets
1061.5 (2.15%) backgr.
motif file (matrix) pdf
65
Nanog(Homeobox)/mES-Nanog-ChIP-Seq/Homer1e-20.0313230.0 (61.50%) targets
27342.7 (55.36%) backgr.
motif file (matrix) pdf

 
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