LoGo

Known motif enrichment results for urothelial cells

Total target sequences = 338
Total background sequences = 49620

Rank
Motif
Name
P-value
q-value
(Benjamini)
Enrichment
Motif File
PDF
1
HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer1e-660.0000139.0 (41.12%) targets
3582.6 (7.22%) backgr.
motif file (matrix) pdf
2
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer1e-600.0000146.0 (43.20%) targets
4510.6 (9.10%) backgr.
motif file (matrix) pdf
3
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer1e-400.000073.0 (21.60%) targets
1428.2 (2.88%) backgr.
motif file (matrix) pdf
4
p63(p53)/Keratinocyte-p63-ChIP-Seq/Homer1e-140.000055.0 (16.27%) targets
2413.9 (4.87%) backgr.
motif file (matrix) pdf
5
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-110.000039.0 (11.54%) targets
1484.4 (2.99%) backgr.
motif file (matrix) pdf
6
NF-E2(bZIP)/K562-NFE2-ChIP-Seq/Homer1e-80.000016.0 (4.73%) targets
333.5 (0.67%) backgr.
motif file (matrix) pdf
7
ERG(ETS)/VCaP-ERG-ChIP-Seq/Homer1e-80.0000145.0 (42.90%) targets
13929.9 (28.09%) backgr.
motif file (matrix) pdf
8
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-70.0000112.0 (33.14%) targets
9975.7 (20.12%) backgr.
motif file (matrix) pdf
9
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-70.000079.0 (23.37%) targets
6271.5 (12.65%) backgr.
motif file (matrix) pdf
10
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-70.000013.0 (3.85%) targets
262.1 (0.53%) backgr.
motif file (matrix) pdf
11
p53(p53)/Saos-p53-ChIP-Seq/Homer1e-70.000018.0 (5.33%) targets
536.5 (1.08%) backgr.
motif file (matrix) pdf
12
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq/Homer1e-70.0000103.0 (30.47%) targets
9104.8 (18.36%) backgr.
motif file (matrix) pdf
13
Klf4(Zf)/mES-Klf4-ChIP-Seq/Homer1e-70.000057.0 (16.86%) targets
3972.1 (8.01%) backgr.
motif file (matrix) pdf
14
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq/Homer1e-70.000070.0 (20.71%) targets
5371.7 (10.83%) backgr.
motif file (matrix) pdf
15
ETV1(ETS)/GIST48-ETV1-ChIP-Seq/Homer1e-60.0000125.0 (36.98%) targets
11995.9 (24.19%) backgr.
motif file (matrix) pdf
16
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-60.000036.0 (10.65%) targets
2040.2 (4.11%) backgr.
motif file (matrix) pdf
17
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-60.000077.0 (22.78%) targets
6333.0 (12.77%) backgr.
motif file (matrix) pdf
18
HIF2a(HLH)/O785-HIF2a-ChIP-Seq(GSE34871)/Homer1e-60.000044.0 (13.02%) targets
2811.2 (5.67%) backgr.
motif file (matrix) pdf
19
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq/Homer1e-50.000058.0 (17.16%) targets
4499.1 (9.07%) backgr.
motif file (matrix) pdf
20
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-50.0001124.0 (36.69%) targets
12783.1 (25.78%) backgr.
motif file (matrix) pdf
21
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq/Homer1e-50.000159.0 (17.46%) targets
4802.9 (9.68%) backgr.
motif file (matrix) pdf
22
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq/Homer1e-50.000131.0 (9.17%) targets
1883.6 (3.80%) backgr.
motif file (matrix) pdf
23
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq/Homer1e-40.000184.0 (24.85%) targets
7813.2 (15.76%) backgr.
motif file (matrix) pdf
24
Stat3(Stat)/mES-Stat3-ChIP-Seq/Homer1e-40.000153.0 (15.68%) targets
4196.5 (8.46%) backgr.
motif file (matrix) pdf
25
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq/Homer1e-40.000187.0 (25.74%) targets
8247.0 (16.63%) backgr.
motif file (matrix) pdf
26
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq/Homer1e-40.000134.0 (10.06%) targets
2258.0 (4.55%) backgr.
motif file (matrix) pdf
27
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-40.000161.0 (18.05%) targets
5179.2 (10.44%) backgr.
motif file (matrix) pdf
28
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq/Homer1e-40.000257.0 (16.86%) targets
4752.2 (9.58%) backgr.
motif file (matrix) pdf
29
CEBP:AP1/ThioMac-CEBPb-ChIP-Seq/Homer1e-40.000251.0 (15.09%) targets
4098.4 (8.26%) backgr.
motif file (matrix) pdf
30
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-40.000260.0 (17.75%) targets
5174.6 (10.43%) backgr.
motif file (matrix) pdf
31
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-40.0002123.0 (36.39%) targets
13092.2 (26.40%) backgr.
motif file (matrix) pdf
32
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-40.000310.0 (2.96%) targets
296.5 (0.60%) backgr.
motif file (matrix) pdf
33
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-40.0004140.0 (41.42%) targets
15532.7 (31.32%) backgr.
motif file (matrix) pdf
34
CRE(bZIP)/Promoter/Homer1e-40.000525.0 (7.40%) targets
1558.5 (3.14%) backgr.
motif file (matrix) pdf
35
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-40.0006179.0 (52.96%) targets
21183.2 (42.72%) backgr.
motif file (matrix) pdf
36
GRE(NR/IR3)/A549-GR-ChIP-Seq/Homer1e-30.000917.0 (5.03%) targets
881.7 (1.78%) backgr.
motif file (matrix) pdf
37
ARE(NR)/LNCAP-AR-ChIP-Seq/Homer1e-30.001227.0 (7.99%) targets
1848.3 (3.73%) backgr.
motif file (matrix) pdf
38
Sp1(Zf)/Promoter/Homer1e-30.001341.0 (12.13%) targets
3355.4 (6.77%) backgr.
motif file (matrix) pdf
39
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq/Homer1e-30.001547.0 (13.91%) targets
4057.6 (8.18%) backgr.
motif file (matrix) pdf
40
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-30.001547.0 (13.91%) targets
4069.0 (8.21%) backgr.
motif file (matrix) pdf
41
Stat3+il23(Stat)/CD4-Stat3-ChIP-Seq/Homer1e-30.001860.0 (17.75%) targets
5645.9 (11.38%) backgr.
motif file (matrix) pdf
42
PU.1-IRF/Bcell-PU.1-ChIP-Seq/Homer1e-30.002395.0 (28.11%) targets
10116.6 (20.40%) backgr.
motif file (matrix) pdf
43
NFkB-p65-Rel(RHD)/LPS-exp/Homer1e-30.003811.0 (3.25%) targets
500.1 (1.01%) backgr.
motif file (matrix) pdf
44
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq/Homer1e-30.004026.0 (7.69%) targets
1919.6 (3.87%) backgr.
motif file (matrix) pdf
45
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-20.005111.0 (3.25%) targets
522.3 (1.05%) backgr.
motif file (matrix) pdf
46
ETS(ETS)/Promoter/Homer1e-20.007533.0 (9.76%) targets
2784.5 (5.61%) backgr.
motif file (matrix) pdf
47
GRE/RAW264.7-GRE-ChIP-Seq/Homer1e-20.008721.0 (6.21%) targets
1512.8 (3.05%) backgr.
motif file (matrix) pdf
48
Sox2(HMG)/mES-Sox2-ChIP-Seq/Homer1e-20.008755.0 (16.27%) targets
5430.3 (10.95%) backgr.
motif file (matrix) pdf
49
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-20.009187.0 (25.74%) targets
9541.5 (19.24%) backgr.
motif file (matrix) pdf
50
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq/Homer1e-20.009627.0 (7.99%) targets
2174.9 (4.39%) backgr.
motif file (matrix) pdf
51
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq/Homer1e-20.012649.0 (14.50%) targets
4803.7 (9.69%) backgr.
motif file (matrix) pdf
52
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer1e-20.015367.0 (19.82%) targets
7122.8 (14.36%) backgr.
motif file (matrix) pdf
53
AARE(HLH)/mES-cMyc-ChIP-Seq/Homer1e-20.01539.0 (2.66%) targets
442.3 (0.89%) backgr.
motif file (matrix) pdf
54
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq/Homer1e-20.017213.0 (3.85%) targets
812.1 (1.64%) backgr.
motif file (matrix) pdf
55
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq/Homer1e-20.018853.0 (15.68%) targets
5422.5 (10.93%) backgr.
motif file (matrix) pdf
56
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq/Homer1e-20.021818.0 (5.33%) targets
1345.0 (2.71%) backgr.
motif file (matrix) pdf
57
STAT4(Stat)/CD4-Stat4-ChIP-Seq/Homer1e-20.023865.0 (19.23%) targets
7031.4 (14.18%) backgr.
motif file (matrix) pdf
58
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-20.031892.0 (27.22%) targets
10718.2 (21.61%) backgr.
motif file (matrix) pdf
59
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq/Homer1e-20.0339214.0 (63.31%) targets
28200.0 (56.86%) backgr.
motif file (matrix) pdf
60
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq/Homer1e-20.0344126.0 (37.28%) targets
15451.7 (31.16%) backgr.
motif file (matrix) pdf

 
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