LoGo

Known motif enrichment results for neurons

Total target sequences = 419
Total background sequences = 48322

Rank
Motif
Name
P-value
q-value
(Benjamini)
Enrichment
Motif File
PDF
1
RFX(HTH)/K562-RFX3-ChIP-Seq/Homer1e-140.000031.0 (7.40%) targets
570.2 (1.18%) backgr.
motif file (matrix) pdf
2
X-box(HTH)/NPC-H3K4me1-ChIP-Seq/Homer1e-120.000030.0 (7.16%) targets
669.4 (1.39%) backgr.
motif file (matrix) pdf
3
Rfx1(HTH)/NPC-Rfx1-ChIP-Seq/Homer1e-110.000041.0 (9.79%) targets
1314.3 (2.73%) backgr.
motif file (matrix) pdf
4
Sox2(HMG)/mES-Sox2-ChIP-Seq/Homer1e-80.000095.0 (22.67%) targets
5867.2 (12.18%) backgr.
motif file (matrix) pdf
5
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq/Homer1e-80.000040.0 (9.55%) targets
1562.7 (3.24%) backgr.
motif file (matrix) pdf
6
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-80.000044.0 (10.50%) targets
1882.3 (3.91%) backgr.
motif file (matrix) pdf
7
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-80.000069.0 (16.47%) targets
3832.7 (7.96%) backgr.
motif file (matrix) pdf
8
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer1e-70.000070.0 (16.71%) targets
4152.3 (8.62%) backgr.
motif file (matrix) pdf
9
HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer1e-60.000059.0 (14.08%) targets
3335.0 (6.92%) backgr.
motif file (matrix) pdf
10
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-60.000018.0 (4.30%) targets
468.4 (0.97%) backgr.
motif file (matrix) pdf
11
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-60.0000146.0 (34.84%) targets
11523.2 (23.92%) backgr.
motif file (matrix) pdf
12
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer1e-60.000029.0 (6.92%) targets
1155.0 (2.40%) backgr.
motif file (matrix) pdf
13
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-50.0000156.0 (37.23%) targets
12894.6 (26.77%) backgr.
motif file (matrix) pdf
14
CRE(bZIP)/Promoter/Homer1e-50.000130.0 (7.16%) targets
1407.7 (2.92%) backgr.
motif file (matrix) pdf
15
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-40.0002131.0 (31.26%) targets
10722.2 (22.26%) backgr.
motif file (matrix) pdf
16
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-30.001532.0 (7.64%) targets
1778.3 (3.69%) backgr.
motif file (matrix) pdf
17
NFY(CCAAT)/Promoter/Homer1e-30.002370.0 (16.71%) targets
5222.5 (10.84%) backgr.
motif file (matrix) pdf
18
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq/Homer1e-30.004833.0 (7.88%) targets
1998.4 (4.15%) backgr.
motif file (matrix) pdf
19
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq/Homer1e-30.008846.0 (10.98%) targets
3229.5 (6.70%) backgr.
motif file (matrix) pdf
20
Nanog(Homeobox)/mES-Nanog-ChIP-Seq/Homer1e-30.0106258.0 (61.58%) targets
25992.1 (53.96%) backgr.
motif file (matrix) pdf
21
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-20.0141188.0 (44.87%) targets
18110.3 (37.60%) backgr.
motif file (matrix) pdf
22
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-20.017459.0 (14.08%) targets
4601.8 (9.55%) backgr.
motif file (matrix) pdf
23
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq/Homer1e-20.0275139.0 (33.17%) targets
12992.7 (26.97%) backgr.
motif file (matrix) pdf
24
NF-E2(bZIP)/K562-NFE2-ChIP-Seq/Homer1e-20.03238.0 (1.91%) targets
281.4 (0.58%) backgr.
motif file (matrix) pdf
25
RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer1e-20.032554.0 (12.89%) targets
4273.6 (8.87%) backgr.
motif file (matrix) pdf
26
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq/Homer1e-20.040952.0 (12.41%) targets
4136.9 (8.59%) backgr.
motif file (matrix) pdf
27
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-20.041161.0 (14.56%) targets
5030.0 (10.44%) backgr.
motif file (matrix) pdf
28
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer1e-20.046874.0 (17.66%) targets
6380.9 (13.25%) backgr.
motif file (matrix) pdf
29
Stat3+il23(Stat)/CD4-Stat3-ChIP-Seq/Homer1e-20.046863.0 (15.04%) targets
5277.2 (10.96%) backgr.
motif file (matrix) pdf
30
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-20.04687.0 (1.67%) targets
247.5 (0.51%) backgr.
motif file (matrix) pdf
31
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq/Homer1e-20.047228.0 (6.68%) targets
1938.1 (4.02%) backgr.
motif file (matrix) pdf
32
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq/Homer1e-20.047215.0 (3.58%) targets
829.6 (1.72%) backgr.
motif file (matrix) pdf
33
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq/Homer1e-20.048877.0 (18.38%) targets
6744.2 (14.00%) backgr.
motif file (matrix) pdf
34
TATA-Box(TBP)/Promoter/Homer1e-20.0488101.0 (24.11%) targets
9251.7 (19.21%) backgr.
motif file (matrix) pdf
35
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-20.048856.0 (13.37%) targets
4630.8 (9.61%) backgr.
motif file (matrix) pdf
36
ERG(ETS)/VCaP-ERG-ChIP-Seq/Homer1e-20.0550127.0 (30.31%) targets
12097.1 (25.11%) backgr.
motif file (matrix) pdf

 
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