LoGo

Known motif enrichment results for chondrocytes

Total target sequences = 307
Total background sequences = 49175

Rank
Motif
Name
P-value
q-value
(Benjamini)
Enrichment
Motif File
PDF
1
HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer1e-370.000097.0 (31.60%) targets
3363.6 (6.84%) backgr.
motif file (matrix) pdf
2
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer1e-360.0000106.0 (34.53%) targets
4167.6 (8.47%) backgr.
motif file (matrix) pdf
3
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer1e-270.000055.0 (17.92%) targets
1347.2 (2.74%) backgr.
motif file (matrix) pdf
4
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-70.0000122.0 (39.74%) targets
12763.2 (25.95%) backgr.
motif file (matrix) pdf
5
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-60.0000175.0 (57.00%) targets
20846.3 (42.38%) backgr.
motif file (matrix) pdf
6
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-60.0000103.0 (33.55%) targets
10324.7 (20.99%) backgr.
motif file (matrix) pdf
7
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-50.0001143.0 (46.58%) targets
16662.6 (33.88%) backgr.
motif file (matrix) pdf
8
NF-E2(bZIP)/K562-NFE2-ChIP-Seq/Homer1e-50.000211.0 (3.58%) targets
324.6 (0.66%) backgr.
motif file (matrix) pdf
9
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-40.0003116.0 (37.79%) targets
13057.7 (26.55%) backgr.
motif file (matrix) pdf
10
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-40.000310.0 (3.26%) targets
274.9 (0.56%) backgr.
motif file (matrix) pdf
11
Klf4(Zf)/mES-Klf4-ChIP-Seq/Homer1e-40.000348.0 (15.64%) targets
4046.3 (8.23%) backgr.
motif file (matrix) pdf
12
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-40.000524.0 (7.82%) targets
1492.1 (3.03%) backgr.
motif file (matrix) pdf
13
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-40.000528.0 (9.12%) targets
1901.8 (3.87%) backgr.
motif file (matrix) pdf
14
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-40.000746.0 (14.98%) targets
3989.2 (8.11%) backgr.
motif file (matrix) pdf
15
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq/Homer1e-40.000830.0 (9.77%) targets
2189.3 (4.45%) backgr.
motif file (matrix) pdf
16
ETV1(ETS)/GIST48-ETV1-ChIP-Seq/Homer1e-40.0010107.0 (34.85%) targets
12284.9 (24.98%) backgr.
motif file (matrix) pdf
17
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq/Homer1e-40.001057.0 (18.57%) targets
5449.7 (11.08%) backgr.
motif file (matrix) pdf
18
CRE(bZIP)/Promoter/Homer1e-40.001025.0 (8.14%) targets
1694.3 (3.44%) backgr.
motif file (matrix) pdf
19
RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer1e-40.001051.0 (16.61%) targets
4708.6 (9.57%) backgr.
motif file (matrix) pdf
20
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-30.001357.0 (18.57%) targets
5552.2 (11.29%) backgr.
motif file (matrix) pdf
21
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-30.001361.0 (19.87%) targets
6071.3 (12.34%) backgr.
motif file (matrix) pdf
22
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq/Homer1e-30.001546.0 (14.98%) targets
4209.0 (8.56%) backgr.
motif file (matrix) pdf
23
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq/Homer1e-30.001525.0 (8.14%) targets
1774.4 (3.61%) backgr.
motif file (matrix) pdf
24
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq/Homer1e-30.002250.0 (16.29%) targets
4808.8 (9.78%) backgr.
motif file (matrix) pdf
25
AARE(HLH)/mES-cMyc-ChIP-Seq/Homer1e-30.002810.0 (3.26%) targets
413.5 (0.84%) backgr.
motif file (matrix) pdf
26
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-30.002959.0 (19.22%) targets
6056.5 (12.31%) backgr.
motif file (matrix) pdf
27
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-30.003255.0 (17.92%) targets
5562.9 (11.31%) backgr.
motif file (matrix) pdf
28
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq/Homer1e-30.006043.0 (14.01%) targets
4156.5 (8.45%) backgr.
motif file (matrix) pdf
29
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq/Homer1e-30.006680.0 (26.06%) targets
9186.9 (18.68%) backgr.
motif file (matrix) pdf
30
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq/Homer1e-20.007647.0 (15.31%) targets
4738.0 (9.63%) backgr.
motif file (matrix) pdf
31
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq/Homer1e-20.008714.0 (4.56%) targets
864.8 (1.76%) backgr.
motif file (matrix) pdf
32
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer1e-20.009763.0 (20.52%) targets
6960.2 (14.15%) backgr.
motif file (matrix) pdf
33
STAT4(Stat)/CD4-Stat4-ChIP-Seq/Homer1e-20.011862.0 (20.20%) targets
6887.8 (14.00%) backgr.
motif file (matrix) pdf
34
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer1e-20.0148115.0 (37.46%) targets
14647.0 (29.78%) backgr.
motif file (matrix) pdf
35
ERG(ETS)/VCaP-ERG-ChIP-Seq/Homer1e-20.0148112.0 (36.48%) targets
14204.3 (28.88%) backgr.
motif file (matrix) pdf
36
ISRE(IRF)/ThioMac-LPS-exp/HOMER1e-20.01618.0 (2.61%) targets
374.7 (0.76%) backgr.
motif file (matrix) pdf
37
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer1e-20.018349.0 (15.96%) targets
5273.3 (10.72%) backgr.
motif file (matrix) pdf
38
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq/Homer1e-20.018640.0 (13.03%) targets
4091.9 (8.32%) backgr.
motif file (matrix) pdf
39
SCL/HPC7-Scl-ChIP-Seq/Homer1e-20.0186226.0 (73.62%) targets
32595.9 (66.27%) backgr.
motif file (matrix) pdf
40
Tlx?/NPC-H3K4me1-ChIP-Seq/Homer1e-20.018639.0 (12.70%) targets
3966.0 (8.06%) backgr.
motif file (matrix) pdf
41
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq/Homer1e-20.019353.0 (17.26%) targets
5857.8 (11.91%) backgr.
motif file (matrix) pdf
42
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq/Homer1e-20.019315.0 (4.89%) targets
1081.3 (2.20%) backgr.
motif file (matrix) pdf
43
HOXA9/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer1e-20.019434.0 (11.07%) targets
3354.3 (6.82%) backgr.
motif file (matrix) pdf
44
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq/Homer1e-20.0212118.0 (38.44%) targets
15358.2 (31.22%) backgr.
motif file (matrix) pdf
45
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-20.025224.0 (7.82%) targets
2168.4 (4.41%) backgr.
motif file (matrix) pdf
46
CArG(MADS)/PUER-Srf-ChIP-Seq/Homer1e-20.025321.0 (6.84%) targets
1813.5 (3.69%) backgr.
motif file (matrix) pdf
47
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq/Homer/1e-20.026224.0 (7.82%) targets
2183.9 (4.44%) backgr.
motif file (matrix) pdf
48
Stat3+il23(Stat)/CD4-Stat3-ChIP-Seq/Homer1e-20.026551.0 (16.61%) targets
5723.8 (11.64%) backgr.
motif file (matrix) pdf
49
NF1(CTF)/LNCAP-NF1-ChIP-Seq/Homer1e-20.026539.0 (12.70%) targets
4106.3 (8.35%) backgr.
motif file (matrix) pdf
50
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer1e-20.026881.0 (26.38%) targets
9997.7 (20.33%) backgr.
motif file (matrix) pdf
51
E-box(HLH)/Promoter/Homer1e-20.029310.0 (3.26%) targets
631.5 (1.28%) backgr.
motif file (matrix) pdf
52
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-20.03216.0 (1.95%) targets
272.2 (0.55%) backgr.
motif file (matrix) pdf
53
Unknown/Homeobox/Limb-p300-ChIP-Seq/Homer1e-20.032733.0 (10.75%) targets
3393.6 (6.90%) backgr.
motif file (matrix) pdf
54
PU.1-IRF/Bcell-PU.1-ChIP-Seq/Homer1e-20.039382.0 (26.71%) targets
10328.6 (21.00%) backgr.
motif file (matrix) pdf
55
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq/Homer1e-20.039368.0 (22.15%) targets
8295.5 (16.87%) backgr.
motif file (matrix) pdf

 
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