Detailed information for motif40

P-value:1e-17
ln P-value:-4.141e+01
Information content per bp:1.557
Number of target sequences with motif:9329.0
Percentage of target sequences with motif:19.02%
Number of background sequences with motif:8573.0
Percentage of background sequences with motif:  17.50%
Average position of motif in targets:208.2 +/- 110.8bp
Average position of motif in background:142.4 +/- 78.6bp
Strand bias (log2 ratio + to - strand density):-0.2
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

GFI1_f1_HM09

Match rank:  1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAHTCDVAGTCMT
AAATCACAGC---
  

POU3F1..4.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAHTCDVAGTCMT-
NNATTTTAATTCCCC
  

MA0038.1_Gfi

Match rank:  3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAHTCDVAGTCMT
CAAATCACTG----
  

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq/Homer

Match rank:  4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAHTCDVAGTCMT
AAATCACTGC---
  

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match rank:  5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAHTCDVAGTCMT
TGAGTGACAGSC--