Detailed information for motif38

P-value:1e-19
ln P-value:-4.509e+01
Information content per bp:1.595
Number of target sequences with motif:7755.0
Percentage of target sequences with motif:15.81%
Number of background sequences with motif:7025.4
Percentage of background sequences with motif:  14.34%
Average position of motif in targets:266.4 +/- 318.0bp
Average position of motif in background:191.4 +/- 19.1bp
Strand bias (log2 ratio + to - strand density):0.6
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0116.1_Zfp423

Match rank:  1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CMACAYAGGGKC--
GGCACCCAGGGGTGC
  

ZNF423.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CMACAYAGGGKC-
GCCCCCCTGGGGGCC
  

PB0101.1_Zic1_1

Match rank:  3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CMACAYAGGGKC
CACCCCCGGGGGGG
  

PB0102.1_Zic2_1

Match rank:  4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CMACAYAGGGKC--
CCCCCCCGGGGGGGT
  

MA0366.1_RGM1

Match rank:  5
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CMACAYAGGGKC
------AGGGG-