Detailed information for motif20

P-value:1e-55
ln P-value:-1.284e+02
Information content per bp:1.937
Number of target sequences with motif:2810.0
Percentage of target sequences with motif:5.73%
Number of background sequences with motif:2067.2
Percentage of background sequences with motif:  4.22%
Average position of motif in targets:255.7 +/- 232.4bp
Average position of motif in background:209.0 +/- 121.1bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.04
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PB0180.1_Sp4_2

Match rank:  1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GGAGTGCC---
CAAAGGCGTGGCCAG
  

EP300.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GGAGTGCC--
GCAGGGAGTGNGNG
  

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq/Homer

Match rank:  3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTGCC-
TTGAGTGSTT
  

PB0133.1_Hic1_2

Match rank:  4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGAGTGCC-------
GGGTGTGCCCAAAAGG
  

HIC1_si_HM09

Match rank:  5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGAGTGCC-
GGGTTGCCC