Detailed information for motif62

P-value:1e-20
ln P-value:-4.746e+01
Information content per bp:1.927
Number of target sequences with motif:1306.0
Percentage of target sequences with motif:3.85%
Number of background sequences with motif:997.8
Percentage of background sequences with motif:  2.94%
Average position of motif in targets:203.5 +/- 109.0bp
Average position of motif in background:190.3 +/- 119.1bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.01
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

ARNT2_si_HM09

Match rank:  1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CGTGGCAG--
GGCGTGGGAGGC
  

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq/Homer

Match rank:  2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CGTGGCAG
CTTGGCAA
  

MA0368.1_RIM101

Match rank:  3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CGTGGCAG
CTTGGCG-
  

NFIA+NFIB+NFIC+NFIX_si_HM09

Match rank:  4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CGTGGCAG
CTTGGCA-
  

MA0161.1_NFIC

Match rank:  5
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CGTGGCAG
-TTGGCA-