Detailed information for motif55

P-value:1e-31
ln P-value:-7.188e+01
Information content per bp:1.821
Number of target sequences with motif:2576.0
Percentage of target sequences with motif:7.59%
Number of background sequences with motif:2039.7
Percentage of background sequences with motif:  6.02%
Average position of motif in targets:201.8 +/- 114.6bp
Average position of motif in background:202.4 +/- 117.0bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.02
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0460.1_ttk

Match rank:  1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GCAGGATA--
-AAGGATAAT
  

PRRX1_f1_HM09

Match rank:  2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCAGGATA
-CAGATTA
  

MA0307.1_GLN3

Match rank:  3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GCAGGATA-
----GATAA
  

MA0036.1_GATA2

Match rank:  4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GCAGGATA
---GGATA
  

GATA3_si_HM09

Match rank:  5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCAGGATA--
--GAGATAAG