Detailed information for motif52

P-value:1e-34
ln P-value:-7.892e+01
Information content per bp:1.862
Number of target sequences with motif:3996.0
Percentage of target sequences with motif:11.77%
Number of background sequences with motif:3298.7
Percentage of background sequences with motif:  9.73%
Average position of motif in targets:201.1 +/- 111.9bp
Average position of motif in background:200.1 +/- 115.8bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.05
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0300.1_GAT1

Match rank:  1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TGATAAGCAR
CCGATAAG---
  

PB0022.1_Gata5_1

Match rank:  2
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----TGATAAGCAR--
TAAACTGATAAGAAGAT
  

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match rank:  3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TGATAAGCAR
NBWGATAAGR--
  

VSX2_si_HM09

Match rank:  4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TGATAAGCAR-
TAATTAGCTAA
  

GATA6.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGATAAGCAR
ANAGATAAGG--