Detailed information for motif13

P-value:1e-185
ln P-value:-4.274e+02
Information content per bp:1.603
Number of target sequences with motif:4426.0
Percentage of target sequences with motif:13.03%
Number of background sequences with motif:2827.1
Percentage of background sequences with motif:  8.34%
Average position of motif in targets:197.0 +/- 95.3bp
Average position of motif in background:199.6 +/- 113.5bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.08
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0107.1_RELA

Match rank:  1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GGAAWTTCCC
GGAAATTCCC
  

NFkB-p65-Rel(RHD)/LPS-exp/Homer

Match rank:  2
Score:0.94
Offset:0
Orientation:forward strand
Alignment:GGAAWTTCCC
GGAAATTCCC
  

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq/Homer

Match rank:  3
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-GGAAWTTCCC-
GGGAAATCCCCN
  

REL_do_HM09

Match rank:  4
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-GGAAWTTCCC-
NGGAAANCCCCN
  

MA0101.1_REL

Match rank:  5
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GGAAWTTCCC
GGAAANCCCC