Detailed information for motif1

P-value:1e-16
ln P-value:-3.884e+01
Information content per bp:1.840
Number of target sequences with motif:14.0
Percentage of target sequences with motif:18.42%
Number of background sequences with motif:269.8
Percentage of background sequences with motif:  0.56%
Average position of motif in targets:198.1 +/- 78.6bp
Average position of motif in background:196.1 +/- 118.7bp
Strand bias (log2 ratio + to - strand density):-0.2
Multiplicity (# of sites on avg that occur together):  1.07
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

SRF.p3.SwissRegulon.nucfreq

Match rank:  1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:CCTTATWTGG--
CCTTATTTGGGC
  

CArG(MADS)/PUER-Srf-ChIP-Seq/Homer

Match rank:  2
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--CCTTATWTGG
TNCCATATATGG
  

SRF_do_HM09

Match rank:  3
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CCTTATWTGG----
TCCATATATGGGCAT
  

SRF_MADS_DBD_DBD_MCCATATAWGGN_dimeric

Match rank:  4
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CCTTATWTGG-
GCCATATATGGT
  

PB0078.1_Srf_1

Match rank:  5
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--CCTTATWTGG--
TNCCATATATGGNA