Detailed information for motif2

P-value:1e-21
ln P-value:-4.922e+01
Information content per bp:1.884
Number of target sequences with motif:96.0
Percentage of target sequences with motif:34.04%
Number of background sequences with motif:5898.3
Percentage of background sequences with motif:  11.99%
Average position of motif in targets:197.5 +/- 85.4bp
Average position of motif in background:201.0 +/- 119.3bp
Strand bias (log2 ratio + to - strand density):0.3
Multiplicity (# of sites on avg that occur together):  1.18
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

JUN_f1_HM09

Match rank:  1
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-TGACTCA-
NTGACTCAN
  

JUNB_f1_HM09

Match rank:  2
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-TGACTCA--
NTGACTCANN
  

BATF_si_HM09

Match rank:  3
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--TGACTCA-
NATGACTCAT
  

SMRC1_f1_HM09

Match rank:  4
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-TGACTCA-
NTGACTCAN
  

MA0099.2_AP1

Match rank:  5
Score:0.96
Offset:0
Orientation:forward strand
Alignment:TGACTCA
TGACTCA