Detailed information for motif1

P-value:1e-15
ln P-value:-3.472e+01
Information content per bp:1.819
Number of target sequences with motif:36.0
Percentage of target sequences with motif:26.67%
Number of background sequences with motif:2550.5
Percentage of background sequences with motif:  5.39%
Average position of motif in targets:209.4 +/- 88.3bp
Average position of motif in background:196.7 +/- 116.9bp
Strand bias (log2 ratio + to - strand density):0.4
Multiplicity (# of sites on avg that occur together):  1.11
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

ENCODE UW.Motif.0001

Match rank:  1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ATGACTCA
ATGACTCA
  

BATF_si_HM09

Match rank:  2
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-ATGACTCA-
NATGACTCAT
  

JUND_f1_HM09

Match rank:  3
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-ATGACTCA--
GATGACTCATC
  

JUN_f1_HM09

Match rank:  4
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:ATGACTCA-
NTGACTCAN
  

JDP2_bZIP_full_full_ATGASTCAT_dimeric

Match rank:  5
Score:0.96
Offset:0
Orientation:forward strand
Alignment:ATGACTCA-
ATGACTCAT