Detailed information for motif6

P-value:1e-17
ln P-value:-3.968e+01
Information content per bp:1.647
Number of target sequences with motif:152.0
Percentage of target sequences with motif:26.39%
Number of background sequences with motif:6171.6
Percentage of background sequences with motif:  12.98%
Average position of motif in targets:205.6 +/- 93.9bp
Average position of motif in background:188.6 +/- 119.9bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.32
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

SP1_f1_HM09

Match rank:  1
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:TTGCCCCGCCC--
--GCCCCGCCCCC
  

KLF4_f2_HM09

Match rank:  2
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:TTGCCCCGCCC-
--GCCCCGCCCN
  

SP1.p2.SwissRegulon.nucfreq

Match rank:  3
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:TTGCCCCGCCC---
CGGCCCCGCCCCCC
  

MA0039.2_Klf4

Match rank:  4
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:TTGCCCCGCCC-
--GCCCCACCCA
  

KLF4.p3.SwissRegulon.nucfreq

Match rank:  5
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:TTGCCCCGCCC-
--GCCCCACCCA