Detailed information for motif4

P-value:1e-20
ln P-value:-4.669e+01
Information content per bp:1.697
Number of target sequences with motif:63.0
Percentage of target sequences with motif:15.14%
Number of background sequences with motif:1806.7
Percentage of background sequences with motif:  3.71%
Average position of motif in targets:200.0 +/- 103.7bp
Average position of motif in background:202.6 +/- 118.8bp
Strand bias (log2 ratio + to - strand density):-0.3
Multiplicity (# of sites on avg that occur together):  1.08
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

NFKB1_f1_HM09

Match rank:  1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:SGGGACTTCCCC
-GGGGATTCCCC
  

NFKB1_REL_RELA.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:SGGGACTTCCCC
-GGGGCTTTCCC
  

ZEP1_f1_HM09

Match rank:  3
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:SGGGACTTCCCC
GGGGATTTCCCA
  

NFkB-p50,p52(RHD)/p50-ChIP-Chip/Homer

Match rank:  4
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:SGGGACTTCCCC-
-GGGGATTCCCCC
  

MA0061.1_NF-kappaB

Match rank:  5
Score:0.77
Offset:1
Orientation:forward strand
Alignment:SGGGACTTCCCC
-GGGAATTTCC-