Detailed information for motif2

P-value:1e-29
ln P-value:-6.791e+01
Information content per bp:1.645
Number of target sequences with motif:62.0
Percentage of target sequences with motif:14.22%
Number of background sequences with motif:1096.5
Percentage of background sequences with motif:  2.26%
Average position of motif in targets:195.3 +/- 64.5bp
Average position of motif in background:199.0 +/- 116.6bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.27
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0288.1_CUP9

Match rank:  1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGTCACAATG
AATGTGTCA-----
  

ATF3_f1_HM09

Match rank:  2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTGTGTCACAATG
TGGCGTCAC----
  

ENCODE UW.Motif.0026

Match rank:  3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TTGTGTCACAATG
---TTNCACAAT-
  

MA0252.1_vis

Match rank:  4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTGTGTCACAATG
--CTGTCA-----
  

MA0078.1_Sox17

Match rank:  5
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TTGTGTCACAATG--
------GACAATGNN