Detailed information for motif15

P-value:1e-18
ln P-value:-4.307e+01
Information content per bp:1.649
Number of target sequences with motif:209.0
Percentage of target sequences with motif:17.82%
Number of background sequences with motif:4523.5
Percentage of background sequences with motif:  9.35%
Average position of motif in targets:198.1 +/- 112.6bp
Average position of motif in background:199.2 +/- 122.8bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.15
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PB0119.1_Foxa2_2

Match rank:  1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GAAATAACAA----
AAAAATAACAAACGG
  

PB0093.1_Zfp105_1

Match rank:  2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GAAATAACAA---
AACAAACAACAAGAG
  

MA0127.1_PEND

Match rank:  3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GAAATAACAA--
--AATAAGAAGT
  

HBP1_HMGB_SSRP1_UBTF.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:GAAATAACAA-
-----AACAAT
  

MA0217.1_caup

Match rank:  5
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GAAATAACAA
----TAACA-