Detailed information for motif5

P-value:1e-17
ln P-value:-3.970e+01
Information content per bp:1.707
Number of target sequences with motif:68.0
Percentage of target sequences with motif:25.86%
Number of background sequences with motif:3977.9
Percentage of background sequences with motif:  8.09%
Average position of motif in targets:198.3 +/- 110.5bp
Average position of motif in background:199.1 +/- 119.9bp
Strand bias (log2 ratio + to - strand density):-0.6
Multiplicity (# of sites on avg that occur together):  1.08
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PB0142.1_Jundm2_2

Match rank:  1
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GTGATTCATC---
NNGGTGACTCATCANN
  

FOS_FOS{B,L1}_JUN{B,D}.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTGATTCATC
GTGAGTCA--
  

MA0099.1_Fos

Match rank:  3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GTGATTCATC
GTGAGTCA--
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GTGATTCATC
ATGACTCATC
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  5
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GTGATTCATC
NNATGAGTCATN