Detailed information for motif1

P-value:1e-94
ln P-value:-2.169e+02
Information content per bp:1.593
Number of target sequences with motif:202.0
Percentage of target sequences with motif:38.48%
Number of background sequences with motif:3399.0
Percentage of background sequences with motif:  6.88%
Average position of motif in targets:204.0 +/- 63.0bp
Average position of motif in background:201.8 +/- 115.6bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.18
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  1
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-VTGACTCATNN
DVTGASTCAB--
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  2
Score:0.98
Offset:0
Orientation:forward strand
Alignment:VTGACTCATNN
ATGACTCATC-
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  3
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-VTGACTCATNN
NATGACTCATNN
  

JUNB_f1_HM09

Match rank:  4
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:VTGACTCATNN
NTGACTCANN-
  

JUN_f1_HM09

Match rank:  5
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:VTGACTCATNN
NTGACTCAN--