Detailed information for motif25

P-value:1e-16
ln P-value:-3.872e+01
Information content per bp:1.657
Number of target sequences with motif:381.0
Percentage of target sequences with motif:31.70%
Number of background sequences with motif:10284.3
Percentage of background sequences with motif:  21.20%
Average position of motif in targets:198.2 +/- 108.6bp
Average position of motif in background:198.8 +/- 120.7bp
Strand bias (log2 ratio + to - strand density):-0.2
Multiplicity (# of sites on avg that occur together):  1.22
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match rank:  1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AAWMCRCWG-
SSAATCCACANN
  

MA0002.2_RUNX1

Match rank:  2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAWMCRCWG--
AAACCACAGAN
  

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer

Match rank:  3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAWMCRCWG-
AAACCACANN
  

RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer

Match rank:  4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAWMCRCWG
NAAACCACAG
  

POL009.1_DCE_S_II

Match rank:  5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AAWMCRCWG-
----CACAGN