Detailed information for motif18

P-value:1e-18
ln P-value:-4.188e+01
Information content per bp:1.624
Number of target sequences with motif:442.0
Percentage of target sequences with motif:36.77%
Number of background sequences with motif:12244.2
Percentage of background sequences with motif:  25.24%
Average position of motif in targets:197.1 +/- 110.6bp
Average position of motif in background:199.7 +/- 120.8bp
Strand bias (log2 ratio + to - strand density):-0.3
Multiplicity (# of sites on avg that occur together):  1.21
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

DBP.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:GAGTTTGCT
--GTTTGCT
  

MA0326.1_MAC1

Match rank:  2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:GAGTTTGCT--
---TTTGCTCA
  

FOXA1_f1_HM09

Match rank:  3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAGTTTGCT---
-TGTTTACTTTG
  

MA0148.1_FOXA1

Match rank:  4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GAGTTTGCT---
-TGTTTACTTTG
  

PB0130.1_Gm397_2

Match rank:  5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GAGTTTGCT---
NNGCGTGTGTGCNGCN