Detailed information for motif15

P-value:1e-18
ln P-value:-4.317e+01
Information content per bp:1.616
Number of target sequences with motif:130.0
Percentage of target sequences with motif:10.82%
Number of background sequences with motif:2191.4
Percentage of background sequences with motif:  4.52%
Average position of motif in targets:209.7 +/- 111.5bp
Average position of motif in background:203.5 +/- 114.8bp
Strand bias (log2 ratio + to - strand density):0.2
Multiplicity (# of sites on avg that occur together):  1.04
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq/Homer

Match rank:  1
Score:0.79
Offset:3
Orientation:forward strand
Alignment:TGAGCTAATCC
---GCTAATCC
  

PH0139.1_Pitx3

Match rank:  2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCTAATCC----
GNNAGCTAATCCCCCN
  

MA0212.1_bcd

Match rank:  3
Score:0.75
Offset:5
Orientation:forward strand
Alignment:TGAGCTAATCC
-----TAATCC
  

MA0234.1_oc

Match rank:  4
Score:0.74
Offset:5
Orientation:forward strand
Alignment:TGAGCTAATCC
-----TAATCC
  

PH0123.1_Obox3

Match rank:  5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGAGCTAATCC------
ATAGTTAATCCCCCNNA