Detailed information for motif1

P-value:1e-38
ln P-value:-8.837e+01
Information content per bp:1.655
Number of target sequences with motif:80.0
Percentage of target sequences with motif:47.90%
Number of background sequences with motif:4410.7
Percentage of background sequences with motif:  8.94%
Average position of motif in targets:199.3 +/- 67.5bp
Average position of motif in background:198.9 +/- 116.4bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.27
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  1
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-RTGACTCAT
DVTGASTCAB
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  2
Score:0.93
Offset:0
Orientation:forward strand
Alignment:RTGACTCAT-
ATGACTCATC
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  3
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-RTGACTCAT--
NATGACTCATNN
  

JUN_f1_HM09

Match rank:  4
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:RTGACTCAT
NTGACTCAN
  

PB0142.1_Jundm2_2

Match rank:  5
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---RTGACTCAT----
NNGGTGACTCATCANN