Detailed information for motif4

P-value:1e-16
ln P-value:-3.895e+01
Information content per bp:1.836
Number of target sequences with motif:196.0
Percentage of target sequences with motif:46.67%
Number of background sequences with motif:13425.3
Percentage of background sequences with motif:  27.16%
Average position of motif in targets:203.4 +/- 83.2bp
Average position of motif in background:195.5 +/- 115.3bp
Strand bias (log2 ratio + to - strand density):-0.2
Multiplicity (# of sites on avg that occur together):  1.56
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

KLF4_f2_HM09

Match rank:  1
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-GGGTGGGGC
TGGGCGGGGC
  

KLF4.p3.SwissRegulon.nucfreq

Match rank:  2
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-GGGTGGGGC
TGGGTGGGGC
  

MA0039.2_Klf4

Match rank:  3
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-GGGTGGGGC
TGGGTGGGGC
  

KLF1_f1_HM09

Match rank:  4
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--GGGTGGGGC
CAGGGTGTGGC
  

POL003.1_GC-box

Match rank:  5
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---GGGTGGGGC--
AGGGGGCGGGGCTG