Detailed information for motif1

P-value:1e-17
ln P-value:-3.960e+01
Information content per bp:1.847
Number of target sequences with motif:33.0
Percentage of target sequences with motif:35.48%
Number of background sequences with motif:2835.0
Percentage of background sequences with motif:  5.76%
Average position of motif in targets:203.9 +/- 53.6bp
Average position of motif in background:202.0 +/- 117.4bp
Strand bias (log2 ratio + to - strand density):0.4
Multiplicity (# of sites on avg that occur together):  1.18
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

BATF_si_HM09

Match rank:  1
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-TGAGTCAT-
ATGAGTCATA
  

JUNB_f1_HM09

Match rank:  2
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--TGAGTCAT
GATGAGTCAT
  

JUN_f1_HM09

Match rank:  3
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-TGAGTCAT
ATGAGTCAT
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  4
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--TGAGTCAT
GATGAGTCAT
  

JUND_f1_HM09

Match rank:  5
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--TGAGTCAT-
GATGAGTCATC