Detailed information for motif1

P-value:1e-20
ln P-value:-4.766e+01
Information content per bp:1.625
Number of target sequences with motif:39.0
Percentage of target sequences with motif:38.24%
Number of background sequences with motif:2977.3
Percentage of background sequences with motif:  6.09%
Average position of motif in targets:195.2 +/- 58.4bp
Average position of motif in background:201.6 +/- 112.5bp
Strand bias (log2 ratio + to - strand density):-0.5
Multiplicity (# of sites on avg that occur together):  1.13
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  1
Score:0.96
Offset:4
Orientation:forward strand
Alignment:CWKBRTGABTCAB-
----VTGASTCABH
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  2
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:CWKBRTGABTCAB-
--NNATGAGTCATN
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  3
Score:0.94
Offset:3
Orientation:reverse strand
Alignment:CWKBRTGABTCAB
---GATGAGTCAT
  

FOS_FOS{B,L1}_JUN{B,D}.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.94
Offset:4
Orientation:forward strand
Alignment:CWKBRTGABTCAB
----GTGAGTCA-
  

MA0099.1_Fos

Match rank:  5
Score:0.93
Offset:4
Orientation:forward strand
Alignment:CWKBRTGABTCAB
----GTGAGTCA-