Detailed information for motif3

P-value:1e-15
ln P-value:-3.532e+01
Information content per bp:1.772
Number of target sequences with motif:11.0
Percentage of target sequences with motif:4.98%
Number of background sequences with motif:46.8
Percentage of background sequences with motif:  0.09%
Average position of motif in targets:184.7 +/- 88.4bp
Average position of motif in background:183.8 +/- 124.8bp
Strand bias (log2 ratio + to - strand density):-0.6
Multiplicity (# of sites on avg that occur together):  1.09
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AATGAGTCATTGC
NNATGAGTCATN--
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AATGAGTCATTGC
GATGAGTCAT---
  

BATF_si_HM09

Match rank:  3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AATGAGTCATTGC
-ATGAGTCATA--
  

JUND_f1_HM09

Match rank:  4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AATGAGTCATTGC
GATGAGTCATC--
  

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AATGAGTCATTGC
-VTGASTCABH--