Detailed information for motif1

P-value:1e-19
ln P-value:-4.550e+01
Information content per bp:1.699
Number of target sequences with motif:62.0
Percentage of target sequences with motif:32.29%
Number of background sequences with motif:4200.0
Percentage of background sequences with motif:  8.62%
Average position of motif in targets:196.2 +/- 78.0bp
Average position of motif in background:200.1 +/- 116.5bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.20
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

JUN_f1_HM09

Match rank:  1
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:CATGACTCA-
-NTGACTCAN
  

JUNB_f1_HM09

Match rank:  2
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:CATGACTCA--
-NTGACTCANN
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  3
Score:0.96
Offset:1
Orientation:forward strand
Alignment:CATGACTCA--
-ATGACTCATC
  

JUND_f1_HM09

Match rank:  4
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:CATGACTCA--
GATGACTCATC
  

SMRC1_f1_HM09

Match rank:  5
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:CATGACTCA-
-NTGACTCAN