Detailed information for motif9

P-value:1e-18
ln P-value:-4.308e+01
Information content per bp:1.832
Number of target sequences with motif:175.0
Percentage of target sequences with motif:20.40%
Number of background sequences with motif:4910.5
Percentage of background sequences with motif:  10.07%
Average position of motif in targets:198.0 +/- 90.0bp
Average position of motif in background:190.0 +/- 114.2bp
Strand bias (log2 ratio + to - strand density):-0.3
Multiplicity (# of sites on avg that occur together):  1.23
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

KLF4.p3.SwissRegulon.nucfreq

Match rank:  1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GCCACGCCC-
GCCCCACCCA
  

MA0039.2_Klf4

Match rank:  2
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GCCACGCCC-
GCCCCACCCA
  

KLF4_f2_HM09

Match rank:  3
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GCCACGCCC-
GCCCCGCCCN
  

PB0039.1_Klf7_1

Match rank:  4
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---GCCACGCCC----
TCGACCCCGCCCCTAT
  

Klf4(Zf)/mES-Klf4-ChIP-Seq/Homer

Match rank:  5
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GCCACGCCC-
GCCACACCCA