Detailed information for motif3

P-value:1e-42
ln P-value:-9.850e+01
Information content per bp:1.677
Number of target sequences with motif:297.0
Percentage of target sequences with motif:27.32%
Number of background sequences with motif:5798.1
Percentage of background sequences with motif:  11.87%
Average position of motif in targets:197.5 +/- 90.3bp
Average position of motif in background:200.6 +/- 116.5bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.16
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

ETV4_f1_HM09

Match rank:  1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:CAGGAAGTKNC
CAGGAAGT---
  

MA0156.1_FEV

Match rank:  2
Score:0.92
Offset:0
Orientation:forward strand
Alignment:CAGGAAGTKNC
CAGGAAAT---
  

FEV.p2.SwissRegulon.nucfreq

Match rank:  3
Score:0.92
Offset:0
Orientation:forward strand
Alignment:CAGGAAGTKNC
CAGGAAAT---
  

MA0080.2_SPI1

Match rank:  4
Score:0.91
Offset:1
Orientation:forward strand
Alignment:CAGGAAGTKNC
-AGGAAGT---
  

FEV_f1_HM09

Match rank:  5
Score:0.90
Offset:0
Orientation:forward strand
Alignment:CAGGAAGTKNC
CAGGAAATAA-