Detailed information for motif2

P-value:1e-17
ln P-value:-4.056e+01
Information content per bp:1.732
Number of target sequences with motif:35.0
Percentage of target sequences with motif:11.51%
Number of background sequences with motif:859.6
Percentage of background sequences with motif:  1.73%
Average position of motif in targets:220.3 +/- 95.5bp
Average position of motif in background:191.0 +/- 114.5bp
Strand bias (log2 ratio + to - strand density):0.2
Multiplicity (# of sites on avg that occur together):  1.03
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

SP1.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GGGAGGGCGGGGC--
-GGGGGGCGGGGCCG
  

SP3_f1_HM09

Match rank:  2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGGAGGGCGGGGC-----
GGGGGGGGGCGGGGCCGGGG
  

KLF4_f2_HM09

Match rank:  3
Score:0.79
Offset:3
Orientation:forward strand
Alignment:GGGAGGGCGGGGC
---TGGGCGGGGC
  

KLF4.p3.SwissRegulon.nucfreq

Match rank:  4
Score:0.78
Offset:3
Orientation:forward strand
Alignment:GGGAGGGCGGGGC
---TGGGTGGGGC
  

MA0039.2_Klf4

Match rank:  5
Score:0.78
Offset:3
Orientation:forward strand
Alignment:GGGAGGGCGGGGC
---TGGGTGGGGC