Detailed information for motif6

P-value:1e-36
ln P-value:-8.494e+01
Information content per bp:1.693
Number of target sequences with motif:171.0
Percentage of target sequences with motif:16.29%
Number of background sequences with motif:2589.4
Percentage of background sequences with motif:  5.38%
Average position of motif in targets:214.6 +/- 86.3bp
Average position of motif in background:197.0 +/- 117.3bp
Strand bias (log2 ratio + to - strand density):-0.2
Multiplicity (# of sites on avg that occur together):  1.08
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq/Homer

Match rank:  1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:ATATGCAAAT
ATATGCAAAT
  

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq/Homer

Match rank:  2
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:ATATGCAAAT
TTATGCAAAT
  

PO2F2_si_HM09

Match rank:  3
Score:0.97
Offset:1
Orientation:forward strand
Alignment:ATATGCAAAT
-TATGCAAAT
  

PO2F1_f1_HM09

Match rank:  4
Score:0.95
Offset:1
Orientation:forward strand
Alignment:ATATGCAAAT
-TATGCAAAT
  

PH0144.1_Pou2f2

Match rank:  5
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--ATATGCAAAT----
TTGTATGCAAATTAGA