Detailed information for motif28

P-value:1e-15
ln P-value:-3.683e+01
Information content per bp:1.560
Number of target sequences with motif:79.0
Percentage of target sequences with motif:7.52%
Number of background sequences with motif:1239.0
Percentage of background sequences with motif:  2.57%
Average position of motif in targets:186.1 +/- 119.9bp
Average position of motif in background:204.7 +/- 118.8bp
Strand bias (log2 ratio + to - strand density):-0.3
Multiplicity (# of sites on avg that occur together):  1.05
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MEF2{A,B,C,D}.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:TCTAAAAATA-
-CTAAAAATAG
  

MEF2A_f1_HM09

Match rank:  2
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TCTAAAAATA----
GCTATAAATAGANN
  

MEF2D_f1_HM09

Match rank:  3
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TCTAAAAATA--
NCTAAAAATAGC
  

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match rank:  4
Score:0.83
Offset:0
Orientation:forward strand
Alignment:TCTAAAAATA--
DCYAAAAATAGM
  

MEF2C_f1_HM09

Match rank:  5
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-TCTAAAAATA--
TTCTATAAATAGA