Detailed information for motif27

P-value:1e-16
ln P-value:-3.712e+01
Information content per bp:1.697
Number of target sequences with motif:68.0
Percentage of target sequences with motif:6.48%
Number of background sequences with motif:954.2
Percentage of background sequences with motif:  1.98%
Average position of motif in targets:162.7 +/- 100.3bp
Average position of motif in background:198.6 +/- 116.3bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.06
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MEF2D_f1_HM09

Match rank:  1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CTATTTATATC
GCTATTTTTAGC
  

MA0052.1_MEF2A

Match rank:  2
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CTATTTATATC
CTATTTATAG-
  

MEF2A_f1_HM09

Match rank:  3
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---CTATTTATATC
GTTCTATTTATAGC
  

MEF2{A,B,C,D}.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.83
Offset:0
Orientation:forward strand
Alignment:CTATTTATATC
CTATTTTTAG-
  

MEF2C_f1_HM09

Match rank:  5
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTATATC-
NCTATTTATAGAA