Detailed information for motif25

P-value:1e-17
ln P-value:-3.977e+01
Information content per bp:1.812
Number of target sequences with motif:115.0
Percentage of target sequences with motif:10.95%
Number of background sequences with motif:2164.1
Percentage of background sequences with motif:  4.49%
Average position of motif in targets:209.9 +/- 98.1bp
Average position of motif in background:198.9 +/- 118.5bp
Strand bias (log2 ratio + to - strand density):0.2
Multiplicity (# of sites on avg that occur together):  1.04
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

NFkB-p65-Rel(RHD)/LPS-exp/Homer

Match rank:  1
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--GAATTTCCC
GGGAATTTCC-
  

NFKB2_f1_HM09

Match rank:  2
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-GAATTTCCC-
GGAATNTCCCT
  

TF65_f2_HM09

Match rank:  3
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--GAATTTCCC
GGGAATTTCCC
  

MA0107.1_RELA

Match rank:  4
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--GAATTTCCC
GGGAATTTCC-
  

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq/Homer

Match rank:  5
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GAATTTCCC-
GGGAAATCCCCN