Detailed information for motif5

P-value:1e-39
ln P-value:-8.991e+01
Information content per bp:1.561
Number of target sequences with motif:574.0
Percentage of target sequences with motif:33.20%
Number of background sequences with motif:9465.0
Percentage of background sequences with motif:  19.72%
Average position of motif in targets:198.7 +/- 99.8bp
Average position of motif in background:200.5 +/- 116.5bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.16
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

ZEP1_f1_HM09

Match rank:  1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GGGATTTCCCC
GGGGATTTCCCA
  

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq/Homer

Match rank:  2
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--GGGATTTCCCC
NGGGGATTTCCC-
  

NFKB1_f1_HM09

Match rank:  3
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GGGATTTCCCC
GGGGATTCCCC
  

TF65_f2_HM09

Match rank:  4
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GGGATTTCCCC
GGGAATTTCCC-
  

MA0101.1_REL

Match rank:  5
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GGGATTTCCCC
GGGGATTTCC--