Detailed information for motif21

P-value:1e-19
ln P-value:-4.519e+01
Information content per bp:1.720
Number of target sequences with motif:423.0
Percentage of target sequences with motif:24.47%
Number of background sequences with motif:7620.7
Percentage of background sequences with motif:  15.88%
Average position of motif in targets:200.6 +/- 94.2bp
Average position of motif in background:199.4 +/- 121.8bp
Strand bias (log2 ratio + to - strand density):-0.2
Multiplicity (# of sites on avg that occur together):  1.12
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0408.1_TOS8

Match rank:  1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGTGACR-
TTTGACAG
  

MA0222.1_exd

Match rank:  2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGTGACR
TTTTGACA
  

EOMES.p2.SwissRegulon.nucfreq

Match rank:  3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TGTGACR
AGGTGTGAA-
  

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match rank:  4
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TGTGACR
AGGTGTGAAM
  

MA0322.1_INO4

Match rank:  5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TGTGACR
GCATGTGAA-