Detailed information for motif1

P-value:1e-119
ln P-value:-2.751e+02
Information content per bp:1.525
Number of target sequences with motif:332.0
Percentage of target sequences with motif:36.32%
Number of background sequences with motif:4129.0
Percentage of background sequences with motif:  8.49%
Average position of motif in targets:199.5 +/- 68.5bp
Average position of motif in background:202.8 +/- 121.9bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.25
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  1
Score:0.98
Offset:3
Orientation:forward strand
Alignment:NNNVTGACTCAB-
---ATGACTCATC
  

JUN_f1_HM09

Match rank:  2
Score:0.98
Offset:3
Orientation:reverse strand
Alignment:NNNVTGACTCAB
---NTGACTCAN
  

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  3
Score:0.98
Offset:2
Orientation:reverse strand
Alignment:NNNVTGACTCAB
--DVTGASTCAB
  

SMRC1_f1_HM09

Match rank:  4
Score:0.97
Offset:3
Orientation:reverse strand
Alignment:NNNVTGACTCAB
---NTGACTCAN
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  5
Score:0.97
Offset:2
Orientation:forward strand
Alignment:NNNVTGACTCAB--
--NATGACTCATNN